YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: TPS28_ARATH

General Information:
Name(s) found: TPS28_ARATH [Swiss-Prot]
Description(s) found:
Found 12 descriptions.
SHOW ALL
  • Terpenoid synthase 28 OS=Arabidopsis thaliana GN=TPS28 PE=2 SV=1 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 603 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: metabolic process [IEA]
    Molecular Function: magnesium ion binding [IEA]
    lyase activity [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEAIRVFGPK LGSRLSIRSH TTAFPACKLS RFPLTSFPGK HAHLVLLKAT TIPLASGDKE  60
   61 NNRKFEKLGP SEWGNQFLFA HVDLSEMDAL EREIEALKPK VRDMFMSFKG MKSNKKNLFL 120
  121 IYLLVSLGLA HHFEDEIEES VKGCSQEMVE MMDGENDLYT VSIIFWVFRT YGHNISSDIF 180
  181 NRFKGHNGKF KECLATDAKG ILSLYEAAHM GTTTDYILDE ALSFTLSYLE SLAANGTCKP 240
  241 NLVRRIRNAL GLLQNKNVEI LVAKEYIRFY EQEEDCDKTI LEFSMLNLKF LQLHYLQELK 300
  301 LLTKWYKEQD FESKLPPYYR DRIVELHLAT LAYINPKYSR VRIILTMIYT IQIILDDTCD 360
  361 RYASLREVES LAATIERWDH NDHAMEGLPD YLKSVAKFIF HTFQEFEREV SSESGGSYSL 420
  421 KATIEDCKRM MRSNLQLAKW AVTGHLPSFD EYLDVAGVEI AVYFTVAGIL LGMENINKKE 480
  481 AYEWLIFRDK LVRAMSTKAR LVNDLFGYKD DMRRGYVTNS INCYKKQYGV TEEEAFRKLH 540
  541 QMVADGDKMM NEEFLKPINV PHQVLKAVLD TLRAINICYD NEDGFTRLNG NLKNYITSMY 600
  601 VDL

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..603] PSI-BLAST 1000.0 5-EPI-ARISTOLOCHENE SYNTHASE FROM NICOTIANA TABACUM

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • catalytic activity
    		•  1.87397377711135 bayes_pls_golite062009
  • transferase activity
    		•  1.34929557841705 bayes_pls_golite062009
  • transferase activity, transferring alkyl or aryl (other than methyl) groups
    		•  1.22586398285056 bayes_pls_golite062009
  • prenyltransferase activity
    		•  0.302854173865421 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.75

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle