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Protein Overview: gi|9294065, gi|1...

General Information:
Name(s) found: gi|9294065 [NCBI NR]
gi|18401769 [NCBI NR]
gi|14268524 [NCBI NR]
Description(s) found:
Found 12 descriptions.
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  • gi|9294065|dbj|BAB02022.1| unnamed protein product [Arabidopsis thaliana] [NCBI NR]
  • gi|18401769|ref|NP_566597.1| MYB4R1 (myb domain protein 4R1); transcription factor [Arabidopsis thaliana] [NCBI NR]
  • gi|14268524|gb|AAK56549.1| putative transcription factor [Arabidopsis thaliana] [NCBI NR]
    • Organism: Arabidopsis thaliana
    Length: 847 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: regulation of transcription [TAS]
    Molecular Function: transcription factor activity [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNRNSLYEAD DDDDDDEEDD IGEDLEDLRR ACMVSDVNSD QFASKTGSIE PEGVGGGEIP  60
   61 SDSENEDDFE MLRTIKSQLA SSKDAGRSSG PPMGLSLLSD SESEDDFEMI RSIKSQLSLS 120
  121 MDVSLPPIGL SDDEEDDAFE TLRAIRRRFS AYKNFDSEGK FMNDSHGKKK QVHNSDNEPS 180
  181 SEILSRSNTC ESFPDHGKSV VTVPDSEDVQ DGHMPAASSS FPEAARAFVD AIRRNRAYQK 240
  241 FLRGKLAEIE ATIEQNEKHK KNVRIVKDFQ ASCKRITKLA LCQRKDPRVE LISTRKSGPC 300
  301 DSSEVIGPCD SFEGNDKKIS PLTLGPAENP CVENYRMALE KYPISVKRRK WSTEENKNLA 360
  361 KGLKQEVQKI LLSEAIERSS DLEGATYDID TINESIGNLE ITPEMIRQFL PKINWDSLDI 420
  421 KDRSAAECEA RWMSSEDPLI NHGPWTAAED KNLLRTIEQT SLTDWVDIAV SLGTNRTPFQ 480
  481 CLARYQRSLN PSILKKEWTA EEDDQLRTAV ELFGEKDWQS VANVLKGRTG TQCSNRWKKS 540
  541 LRPTRKGTWS LEEDKRVKVA VTLFGSQNWH KISQFVPGRT QTQCRERWLN CLDPKVNRGK 600
  601 WTEEEDEKLR EAIAEHGYSW SKVATNLSCR TDNQCLRRWK RLYPHQVALL QEARRLQKEA 660
  661 SVGNFVDRES ERPALVTSPI LALPDISLEP EPDSVALKKK RKAKQKKSDA ERQPKRRRKG 720
  721 LKNCSGDVCR QENETVCENE PNNGGEERML ALECHDEIQD NAKEKPKQRR KSVAETVCEN 780
  781 EPNNGGEERM LALECDNEIQ DNAKEKRKRR RKSVAETSNN TTGLKKLTPR RRKISAVVPI 840
  841 KNQDAPN

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..117] PSI-BLAST 4.522879 Solution structure of J-domain from mouse DnaJ subfamily C menber 5
    2 View Details [118..194] deduced N/A No confident structure predictions are available.
    3 View Details [195..367] deduced N/A No confident structure predictions are available.
    4 View Details [368..438] MSA 4.096995 View MSA. No confident structure predictions are available.
    5 View Details [439..488] PSI-BLAST 30.221849 v-Myb
    6 View Details [489..686] PSI-BLAST 40.69897 c-Myb, DNA-binding domain
    7 View Details [687..847] deduced N/A No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle