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Protein Overview: C3H26_ARATH

General Information:
Name(s) found: C3H26_ARATH [Swiss-Prot]
Description(s) found:
Found 17 descriptions.
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  • Zinc finger CCCH domain-containing protein 26 OS=Arabidopsis thaliana GN=ZFN2 PE=1 SV=1 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 453 amino acids

    Gene Ontology:
    Cellular Component: cellular_component [ND]
    Biological Process: biological_process [ND]
    Molecular Function: nucleic acid binding [ISS]
    DNA binding [TAS]
    nuclease activity [TAS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSETQQQVQN STGSIRSPDK IEDTFRRMKV NEDNMEQSSP YPDRPGERDC QFFLRTGQCG  60
   61 YGNSCRYNHP LTNLPQGIIY YRDQLPERVG QPDCETGACK YGPTCKYHHP KDRNGAGPVL 120
  121 FNVLGLPMRQ GEKPCPYYMQ TGLCRFGVAC KFHHPHPHSQ PSNGHSAYAM SSFPSVGFPY 180
  181 ASGMTMVSLP PATYGAIPRP QVPQSQAYMP YMVAPSQGLL PPQGWATYMT ASNPIYNMKT 240
  241 QLDSSSSASV AVTVTSHHHS FSERAECRFF MNTGTCKYGD DCKYSHPKER LLQSPPTLLN 300
  301 PIVLPARPGQ PACGNFKAYG FCKFGANCKF DHSMLLNPYN NTGLAMSSLP TPYPYAPPVS 360
  361 TNLRISSPPS PSDMTTLSNG KPAAAEAQSL ETEKQDDSPT EPEKSEVEDS LPPNGSDSTS 420
  421 LPNDKPDAET EKQDDDSAEL DSSKVQDSSD KST

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..140] PSI-BLAST 17.69897 Structural Basis for Recognition of the mRNA Class II AU-Rich Element by the Tandem Zinc Finger Domain of TIS11d
    2 View Details [141..265] FFAS03 1.01 Crystal Structure of Rat Synapsin I C Domain Complexed to Ca.ATP
    3 View Details [266..336] PSI-BLAST 4.522879 No description for 2e5sA was found.
    4 View Details [337..453] FFAS03 1.66 No description for 2j63A was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.85

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle