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Protein Overview: gi|22326848, gi|...

General Information:
Name(s) found: gi|9759138 [NCBI NR]
gi|4689376 [NCBI NR]
gi|22326848 [NCBI NR]
Description(s) found:
Found 12 descriptions.
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  • gi|9759138|dbj|BAB09623.1| zinc finger protein 3 [Arabidopsis thaliana] [NCBI NR]
  • gi|4689376|gb|AAD27875.1|AF138872_1 zinc finger protein 3 [Arabidopsis thaliana] [NCBI NR]
  • gi|22326848|ref|NP_568332.2| ZFN3 (ZINC FINGER NUCLEASE 3); DNA binding / nuclease/ nucleic acid binding [Arabidopsis thaliana] [NCBI NR]
    • Organism: Arabidopsis thaliana
    Length: 368 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDFDSISRES TFLSPLLNQN AMWQMNLGSD DTMGVDGSYP ERHGEPDCAY YIRTGLCRFG  60
   61 STCRFNHPHD RKLVIATARI KGEYPERIGQ PECEFYLKTG TCKFGVTCKF HHPRNKAGID 120
  121 GSVSVNVLSY PLRPNEDDCS YFLRIGQCKF GGTCKFNHPQ TQSTNLMVSV RGSPVYSALQ 180
  181 SLTGQPSYSW SRTSFVANPP RLQDPSGFAS GSQGGLFSSG FHSGNSVPLG FYALPRENVF 240
  241 PERPGQPECQ FYMKTGDCKF GTVCKFHHPR DRQTPPPDCV LSSGEPLCVF YSRYGICKFG 300
  301 PSCKFDHPMR VFTYNNNTAS PSPSSSLHQE TAITTELRNL LVSSSVEAKP TSLPETTSAK 360
  361 DTIVDAQH

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..123] PSI-BLAST 6.045757 No description for 2d9nA was found.
    2 View Details [124..232] FFAS03 2.15 No description for 2d9nA was found.
    3 View Details [233..368] PSI-BLAST 12.69897 Structural Basis for Recognition of the mRNA Class II AU-Rich Element by the Tandem Zinc Finger Domain of TIS11d


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.98

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle