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Protein Overview: DRE1B_ARATH

General Information:
Name(s) found: DRE1B_ARATH [Swiss-Prot]
Description(s) found:
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  • pir||JE0298 transcription factor DREB1B, low-temperature induced [validated] - Arabidopsis thaliana [NCBI NR]
  • gi|7269399|emb|CAB81359.1| transcriptional activator CBF1/ CRT/CRE binding factor 1 [Arabidopsis thaliana] [NCBI NR]
  • gi|47605622|sp|P93835.2|DRE1B_ARATH RecName: Full=Dehydration-responsive element-binding protein 1B; Short=Protein DREB1B; AltName: Full=C-repeat/dehydration-responsive element-binding factor 1; Short=CRT/DRE-binding factor 1; Short=C-repeat-binding facto [NCBI NR]
  • gi|3738226|dbj|BAA33792.1| DREB1B [Arabidopsis thaliana] [NCBI NR]
  • gi|3660550|dbj|BAA33435.1| DREB1B [Arabidopsis thaliana] [NCBI NR]
  • gi|2980801|emb|CAA18177.1| transcriptional activator CBF1/ CRT/CRE binding factor 1 [Arabidopsis thaliana] [NCBI NR]
  • gi|206585576|gb|ACI15570.1| DRE/CRT-binding factor 1 [Arabidopsis thaliana] [NCBI NR]
  • gi|18416562|ref|NP_567721.1| CBF1 (C-REPEAT/DRE BINDING FACTOR 1); DNA binding / transcription activator/ transcription factor [Arabidopsis thaliana] [NCBI NR]
  • Dehydration-responsive element-binding protein 1B OS=Arabidopsis thaliana GN=DREB1B PE=2 SV=2 [Swiss-Prot]
  • (P93835) Dehydration responsive element binding protein 1B (DREB1B protein) (C-repeat binding factor 1) (C-repeat/dehydration responsive element binding factor 1) (CRT/DRE binding factor 1) [Swiss-Prot]
  • (O65611) Transcriptional activator CBF1 (Transcriptional activator CBF1/ CRT/CRE binding factor 1) [athaliana3702.FASTAC.txt]
  • DREB1B [Arabidopsis thaliana]gi|7269399|emb|CAB81359.1| transcriptional activator CBF1/ CRT/CRE binding factor 1 [Arabidopsis thaliana]gi|2980801|emb|CAA18177.1| transcriptional activator CBF1/ CRT/CRE binding factor 1 [Arabidopsis thaliana]gi|47605622 [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 Dehydration-responsive element-binding protein 1B [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: DREB1B, CBF1 | CBF1 (C-REPEAT/DRE BINDING FACTOR 1); DNA binding / transcription activator/ transcription factor | chr4:13021931-13022572 REVERSE [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • transcriptional activator CBF1/ CRT/CRE binding factor 1 [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • Dehydration-responsive element-binding protein 1B (DREB1B protein) (C-repeat-binding factor 1) (C-repeat/dehydration-responsive element-binding factor 1) (CRT/DRE-binding factor 1) [nr-271106-contam.fasta]
  • DREB1B [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • CBF1 (C-REPEAT/DRE BINDING FACTOR 1); DNA binding / transcription factor/ transcriptional activator [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: CBF1, DREB1B, ATCBF1 | C-repeat/DRE binding factor 1 | chr4:13021921-13022562 REVERSE LENGTH=213 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
    • Organism: Arabidopsis thaliana
    Length: 213 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IC]
    Biological Process: response to cold [IEP][IMP][TAS]
    cold acclimation [IEP][IMP]
    response to water deprivation [IEP]
    Molecular Function: DNA binding [IEP]
    transcription factor activity [ISS]
    transcription activator activity [IDA][IGI][TAS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNSFSAFSEM FGSDYEPQGG DYCPTLATSC PKKPAGRKKF RETRHPIYRG VRQRNSGKWV  60
   61 SEVREPNKKT RIWLGTFQTA EMAARAHDVA ALALRGRSAC LNFADSAWRL RIPESTCAKD 120
  121 IQKAAAEAAL AFQDETCDTT TTNHGLDMEE TMVEAIYTPE QSEGAFYMDE ETMFGMPTLL 180
  181 DNMAEGMLLP PPSVQWNHNY DGEGDGDVSL WSY

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..137] PSI-BLAST 22.39794 GCC-box binding domain
    2 View Details [138..213] MSA 1.230992 View MSA. No confident structure predictions are available.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • binding
    		•  0.339357445627225 bayes_pls_golite062009
    2 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle