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Protein Overview: gi|15237916, gi|...

General Information:
Name(s) found: gi|20465809 [NCBI NR]
gi|17529272 [NCBI NR]
gi|15237916 [NCBI NR]
gi|10177080 [NCBI NR]
Description(s) found:
Found 13 descriptions.
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  • gi|20465809|gb|AAM20009.1| unknown protein [Arabidopsis thaliana] [NCBI NR]
  • gi|17529272|gb|AAL38863.1| unknown protein [Arabidopsis thaliana] [NCBI NR]
  • gi|15237916|ref|NP_197809.1| lipase class 3 family protein [Arabidopsis thaliana] [NCBI NR]
  • gi|10177080|dbj|BAB10386.1| unnamed protein product [Arabidopsis thaliana] [NCBI NR]
    • Organism: Arabidopsis thaliana
    Length: 350 amino acids

    Gene Ontology:
    Cellular Component: cellular_component [ND]
    Biological Process: lipid metabolic process [IEA][ISS]
    Molecular Function: triglyceride lipase activity [IEA][ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGNLKKSTRS DELSRSGPPQ IPNPDWNNLY HRTTVASCLV QGVYAKERDR ENNRNGSESL  60
   61 ATPWWKSFNF TLDESEILYD AFDGSIYGAV FQNMINYENT PNSIVVPPRY VIALRGTVPS 120
  121 DVSDWIHNSR IVLEKLHGGG KHMHVIRKIY SLVAKHGNTA VWIAGHSLGA GLALLAGKDM 180
  181 AMSGLPVEAY IFNPPISLIP LEQCGYNHEL NFVYRLTRDL FKAGIAKVVD LDEGQEGPRY 240
  241 KNLASWRPHL FVNQSDVICS EYIGYFNHVV TMTEAGLGEI SRLASGYSVR RMLFGDGENW 300
  301 SSSSTPDHLH FLPSAFMIVN KTEASEFYNK HGIHQWWNHM LKQSTTFSSY

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..246] PSI-BLAST 33.221849 AN UNUSUAL BURIED POLAR CLUSTER IN A FAMILY OF FUNGAL LIPASES
    2 View Details [247..350] deduced N/A No confident structure predictions are available.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • catalytic activity
    		•  0.866238607554457 bayes_pls_golite062009
  • hydrolase activity
    		•  0.52702612560045 bayes_pls_golite062009
    2 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.88

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle