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Protein Overview: NRPA1_ARATH

General Information:
Name(s) found: NRPA1_ARATH [Swiss-Prot]
Description(s) found:
Found 12 descriptions.
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  • DNA-directed RNA polymerase I subunit 1 OS=Arabidopsis thaliana GN=NRPA1 PE=3 SV=1 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 1670 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IDA][ISS]
    Biological Process: transcription [IEA][ISS]
    Molecular Function: DNA binding [IEA][ISS]
    zinc ion binding [IEA]
    DNA-directed RNA polymerase activity [IEA][ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAHAQTTEVC LSFHRSLLFP MGASQVVESV RFSFMTEQDV RKHSFLKVTS PILHDNVGNP  60
   61 FPGGLYDLKL GPKDDKQACN SCGQLKLACP GHCGHIELVF PIYHPLLFNL LFNFLQRACF 120
  121 FCHHFMAKPE DVERAVSQLK LIIKGDIVSA KQLESNTPTK SKSSDESCES VVTTDSSEEC 180
  181 EDSDVEDQRW TSLQFAEVTA VLKNFMRLSS KSCSRCKGIN PKLEKPMFGW VRMRAMKDSD 240
  241 VGANVIRGLK LKKSTSSVEN PDGFDDSGID ALSEVEDGDK ETREKSTEVA AEFEEHNSKR 300
  301 DLLPSEVRNI LKHLWQNEHE FCSFIGDLWQ SGSEKIDYSM FFLESVLVPP TKFRPPTTGG 360
  361 DSVMEHPQTV GLNKVIESNN ILGNACTNKL DQSKVIFRWR NLQESVNVLF DSKTATVQSQ 420
  421 RDSSGICQLL EKKEGLFRQK MMGKRVNHAC RSVISPDPYI AVNDIGIPPC FALKLTYPER 480
  481 VTPWNVEKLR EAIINGPDIH PGATHYSDKS STMKLPSTEK ARRAIARKLL SSRGATTELG 540
  541 KTCDINFEGK TVHRHMRDGD IVLVNRQPTL HKPSLMAHKV RVLKGEKTLR LHYANCSTYN 600
  601 ADFDGDEMNV HFPQDEISRA EAYNIVNANN QYARPSNGEP LRALIQDHIV SSVLLTKRDT 660
  661 FLDKDHFNQL LFSSGVTDMV LSTFSGRSGK KVMVSASDAE LLTVTPAILK PVPLWTGKQV 720
  721 ITAVLNQITK GHPPFTVEKA TKLPVDFFKC RSREVKPNSG DLTKKKEIDE SWKQNLNEDK 780
  781 LHIRKNEFVC GVIDKAQFAD YGLVHTVHEL YGSNAAGNLL SVFSRLFTVF LQTHGFTCGV 840
  841 DDLIILKDMD EERTKQLQEC ENVGERVLRK TFGIDVDVQI DPQDMRSRIE RILYEDGESA 900
  901 LASLDRSIVN YLNQCSSKGV MNDLLSDGLL KTPGRNCISL MTISGAKGSK VNFQQISSHL 960
  961 GQQDLEGKRV PRMVSGKTLP CFHPWDWSPR AGGFISDRFL SGLRPQEYYF HCMAGREGLV1020
 1021 DTAVKTSRSG YLQRCLMKNL ESLKVNYDCT VRDADGSIIQ FQYGEDGVDV HRSSFIEKFK1080
 1081 ELTINQDMVL QKCSEDMLSG ASSYISDLPI SLKKGAEKFV EAMPMNERIA SKFVRQEELL1140
 1141 KLVKSKFFAS LAQPGEPVGV LAAQSVGEPS TQMTLNTFHL AGRGEMNVTL GIPRLQEILM1200
 1201 TAAANIKTPI MTCPLLKGKT KEDANDITDR LRKITVADII KSMELSVVPY TVYENEVCSI1260
 1261 HKLKINLYKP EHYPKHTDIT EEDWEETMRA VFLRKLEDAI ETHMKMLHRI RGIHNDVTGP1320
 1321 IAGNETDNDD SVSGKQNEDD GDDDGEGTEV DDLGSDAQKQ KKQETDEMDY EENSEDETNE1380
 1381 PSSISGVEDP EMDSENEDTE VSKEDTPEPQ EESMEPQKEV KGVKNVKEQS KKKRRKFVRA1440
 1441 KSDRHIFVKG EGEKFEVHFK FATDDPHILL AQIAQQTAQK VYIQNSGKIE RCTVANCGDP1500
 1501 QVIYHGDNPK ERREISNDEK KASPALHASG VDFPALWEFQ DKLDVRYLYS NSIHDMLNIF1560
 1561 GVEAARETII REINHVFKSY GISVSIRHLN LIADYMTFSG GYRPMSRMGG IAESTSPFCR1620
 1621 MTFETATKFI VQAATYGEKD TLETPSARIC LGLPALSGTG CFDLMQRVEL

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..1670] PSI-BLAST 1000.0 RBP1


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.84

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle