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Protein Overview: GDL88_ARATH

General Information:
Name(s) found: GDL88_ARATH [Swiss-Prot]
Description(s) found:
Found 13 descriptions.
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  • GDSL esterase/lipase At5g62930 OS=Arabidopsis thaliana GN=At5g62930 PE=2 SV=3 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 242 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRPEIVLFGD SITAQSFRSG GWGSALADAY SRKADVVVRG YGGYNTRWAL FLLHHIFPLG  60
   61 SSSPPVATTI FFGANDAALK GRTSDRQHVP VEEYTDNVRK IVQHLKKCSP TMLIVLITPP 120
  121 PIDEAGRQSY AESIYGEKAM KEPERTNETT GVYAQHCVAL AEELGLRCVN LWSKMQETND 180
  181 WQKKYLSDGL HLTPEGNGVV FDEVSRVFRE AWLSPEEMPF DFPHHSHIDG KNPSKAFEER 240
  241 CL

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..242] PSI-BLAST 16.0 Rhamnogalacturonan acetylesterase

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • catalytic activity
    		•  1.15974340242656 bayes_pls_golite062009
  • hydrolase activity
    		•  0.582505020700489 bayes_pls_golite062009
  • binding
    		•  0.462312988204853 bayes_pls_golite062009
  • hydrolase activity, acting on ester bonds
    		•  0.208678652576559 bayes_pls_golite062009
  • protein binding
    		•  0.0338535855669828 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.72

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle