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Protein Overview: ING1_ARATH

General Information:
Name(s) found: ING1_ARATH [Swiss-Prot]
Description(s) found:
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  • gi|9294670|dbj|BAB03019.1| unnamed protein product [Arabidopsis thaliana] [NCBI NR]
  • gi|90568026|gb|ABD94083.1| At3g24010 [Arabidopsis thaliana] [NCBI NR]
  • gi|225898675|dbj|BAH30468.1| hypothetical protein [Arabidopsis thaliana] [NCBI NR]
  • gi|21618065|gb|AAM67115.1| PHD-finger protein, putative [Arabidopsis thaliana] [NCBI NR]
  • gi|18404002|ref|NP_566742.1| ING1 (INHIBITOR OF GROWTH 1); DNA binding / methylated histone residue binding [Arabidopsis thaliana] [NCBI NR]
  • PHD finger protein ING1 OS=Arabidopsis thaliana GN=ING1 PE=1 SV=1 [Swiss-Prot]
  • (Q9LIQ6) Genomic DNA, chromosome 3, BAC clone:F14O13 (PHD-finger protein, putative) [athaliana3702.FASTAC.txt]
  • PHD-finger protein, putative [Arabidopsis thaliana]gi|9294670|dbj|BAB03019.1| unnamed protein product [Arabidopsis thaliana]gi|18404002|ref|NP_566742.1| PHD finger family protein [Arabidopsis thaliana] [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 PHD finger family protein [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: | PHD finger family protein | chr3:8676127-8678193 REVERSE [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • DNA binding / protein binding / zinc ion binding [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • PHD-finger protein, putative [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • unnamed protein product [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • At3g24010 [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: ING1, ATING1 | RING/FYVE/PHD zinc finger superfamily protein | chr3:8676120-8678186 REVERSE LENGTH=234 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
    • Organism: Arabidopsis thaliana
    Length: 234 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IDA]
    Biological Process: regulation of transcription, DNA-dependent [ISS]
    Molecular Function: DNA binding [ISS]
    methylated histone residue binding [IDA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSFAEEFEAN LVSLAHVLQK KYALLRDLDK SLQENQRQNE QRCEKEIEDI RRGRAGNITP  60
   61 NTSLTKFSEE ALDEQKHSVR IADEKVTLAM QAYDLVDMHV QQLDQYMKKS DEVIRKEKEA 120
  121 AAATLELENN GKAGNAGEGG RGGRKKTRLA TAASTAAAST GMTSSNMDLD LPVDPNEPTY 180
  181 CICNQVSFGE MVACDNNACK IEWFHFGCVG LKEQPKGKWY CPECATVKKS RKGR

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..156] FFAS03 1.29 Fibrinogen C-terminal domains; Fibrinogen gamma chain
    2 View Details [157..234] PSI-BLAST 18.0 Solution structure of PHD domain in ING1-like protein BAC25009

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2
    Term Confidence Notes
  • binding
    		•  0.24093737575291 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle