YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: IPT1_ARATH

General Information:
Name(s) found: IPT1_ARATH [Swiss-Prot]
Description(s) found:
Found 13 descriptions.
SHOW ALL
  • Adenylate isopentenyltransferase 1, chloroplastic OS=Arabidopsis thaliana GN=IPT1 PE=1 SV=2 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 357 amino acids

    Gene Ontology:
    Cellular Component: chloroplast [IEA]
    Biological Process: cytokinin biosynthetic process [IGI][TAS]
    secondary growth [IGI]
    Molecular Function: adenylate dimethylallyltransferase activity [IDA][TAS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTELNFHLLP IISDRFTTTT TTSPSFSSHS SSSSSLLSFT KRRRKHQPLV SSIRMEQSRS  60
   61 RNRKDKVVVI LGATGAGKSR LSVDLATRFP SEIINSDKIQ VYEGLEITTN QITLQDRRGV 120
  121 PHHLLGVINP EHGELTAGEF RSAASNVVKE ITSRQKVPII AGGSNSFVHA LLAQRFDPKF 180
  181 DPFSSGSCLI SSDLRYECCF IWVDVSETVL YEYLLRRVDE MMDSGMFEEL SRFYDPVKSG 240
  241 LETRFGIRKA IGVPEFDGYF KEYPPEKKMI KWDALRKAAY DKAVDDIKRN TWTLAKRQVK 300
  301 KIEMLKDAGW EIERVDATAS FKAVMMKSSS EKKWRENWEE QVLEPSVKIV KRHLVQN

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..280] PSI-BLAST 29.0 HslU
    2 View Details [281..357] PSI-BLAST 51.69897 No description for 2qgnA was found.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • binding
    		•  1.41264401383678 bayes_pls_golite062009
  • catalytic activity
    		•  1.00104173493322 bayes_pls_golite062009
  • purine ribonucleotide binding
    		•  0.923452757551011 bayes_pls_golite062009
  • ribonucleotide binding
    		•  0.923391844349459 bayes_pls_golite062009
  • purine nucleotide binding
    		•  0.920821955769652 bayes_pls_golite062009
  • nucleotide binding
    		•  0.917754212279227 bayes_pls_golite062009
  • ATP binding
    		•  0.60527666756293 bayes_pls_golite062009
  • adenyl ribonucleotide binding
    		•  0.573214556107072 bayes_pls_golite062009
  • adenyl nucleotide binding
    		•  0.554530910579109 bayes_pls_golite062009
  • nucleic acid binding
    		•  0.544057265221809 bayes_pls_golite062009
  • hydrolase activity
    		•  0.533811513387322 bayes_pls_golite062009
  • ligase activity
    		•  0.417681194526243 bayes_pls_golite062009
  • RNA helicase activity
    		•  0.18362676509797 bayes_pls_golite062009
  • DNA binding
    		•  0.156173690421144 bayes_pls_golite062009
  • RNA-dependent ATPase activity
    		•  0.0388696977166548 bayes_pls_golite062009
    2 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.93

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle