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Protein Overview: LCKB2_ARATH

General Information:
Name(s) found: LCKB2_ARATH [Swiss-Prot]
Description(s) found:
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  • gi|3702338|gb|AAC62895.1| expressed protein [Arabidopsis thaliana] [NCBI NR]
  • pir||F84898 hypothetical protein At2g46090 [imported] - Arabidopsis thaliana [NCBI NR]
  • gi|18406971|ref|NP_566064.1| diacylglycerol kinase family protein [Arabidopsis thaliana] [NCBI NR]
  • Sphingoid long-chain bases kinase 2, mitochondrial OS=Arabidopsis thaliana GN=LCKB2 PE=2 SV=1 [Swiss-Prot]
  • (O82359) At2g46090 protein [athaliana3702.FASTAC.txt]
  • expressed protein [Arabidopsis thaliana]gi|25408959|pir||F84898 hypothetical protein At2g46090 [imported] - Arabidopsis thalianagi|18406971|ref|NP_566064.1| diacylglycerol kinase family protein [Arabidopsis thaliana] [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 Encodes a putative sphingosine kinase (SphK) containing the five conserved domains (C1-C5) previously identified in SphKs [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: | diacylglycerol kinase family protein | chr2:18957992-18960152 FORWARD [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • expressed protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • D-erythro-sphingosine kinase/ diacylglycerol kinase [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: | Diacylglycerol kinase family protein | chr2:18950919-18953079 FORWARD LENGTH=364 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
    • Organism: Arabidopsis thaliana
    Length: 364 amino acids

    Gene Ontology:
    Cellular Component: mitochondrion [IDA]
    Biological Process: activation of protein kinase C activity by G-protein coupled receptor protein signaling pathway [IEA][ISS]
    Molecular Function: D-erythro-sphingosine kinase activity [TAS]
    diacylglycerol kinase activity [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLRSTCCTPL CPFTAKQPSF LRKQQRITSD RFTFRGGGGG DAAAVVSSSG LRDLVFVVNP  60
   61 QGANGRTAKE WKKLLPHLRS RLGKDCNVSE LLTSGPSHAI DITREAIRDG ADAVIAVGGD 120
  121 GTLHEVVNGF FWEGKPVGYL SGEASRSTAL GLIPLGTGSD FARTFGWNND PCEAVERIAR 180
  181 GMRSRIDVGV IDKEGKDLHY FINVADVHLS AKAGFYASKY KKFGNLCYVI GALQAFMGHH 240
  241 NQDMRIRVNG GEWEIYPQVT ALCVGNAKYF GGGMKITPNA IPGNGNLEVV VLQNFKWYDF 300
  301 VLKLHKLYNG THLSVNNVTS RSVQSIEVEE ITDSGSIYVQ SDGEHLGFLP RKFQVLPGAI 360
  361 DIIS

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..364] PSI-BLAST 48.69897 No description for 2bonA was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.67

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle