YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: gi|12597819, gi|...

General Information:
Name(s) found: gi|15221969 [NCBI NR]
gi|12597819 [NCBI NR]
Description(s) found:
Found 10 descriptions.
SHOW ALL
  • gi|15221969|ref|NP_175313.1| terpene synthase/cyclase family protein [Arabidopsis thaliana] [NCBI NR]
  • gi|12597819|gb|AAG60130.1|AC073555_14 terpene cyclase, putative [Arabidopsis thaliana] [NCBI NR]
    • Organism: Arabidopsis thaliana
    Length: 561 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: metabolic process [IEA]
    Molecular Function: magnesium ion binding [IEA]
    lyase activity [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEAIRVFGLK LGSKLSIHSQ TNAFPAFKLS RFPLTSFPGK HAHLDPLKAT THPLAFDGEE  60
   61 NNREFKNLGP SEWGHQFLSA HVDLSEMDAL EREIEALKPK VRDMLISSES SKKKILFLYL 120
  121 LVSLGLAYHF EDEIKESLED GLQKIEEMMA SEDDLRFKGD NGKFKECLAK DAKGILSLYE 180
  181 AAHMGTTTDY ILDEALSFTL TYMESLAASG TCKINLSRRI RKALDQPQHK NMEIIVAMKY 240
  241 IQFYEEEEDC DKTLLKFAKL NFKFLQLHYL QELKILSKWY KDQDFKSKLP PYFRDRLVEC 300
  301 HFASLTCFEP KYARARIFLS KIFTVQIFID DTCDRYASLG EVESLADTIE RWDPDDHAMD 360
  361 GLPDYLKSVV KFVFNTFQEF ERKCKRSLRI NLQVAKWVKA GHLPSFDEYL DVAGLELAIS 420
  421 FTFAGILMGM ENVCKPEAYE WLKSRDKLVR GVITKVRLLN DIFGYEDDMR RGYVTNSINC 480
  481 YKKQYGVTEE EAIRKLHQIV ADGEKMMNEE FLKPINVPYQ VPKVVILDTL RAANVSYEKD 540
  541 DEFTRPGEHL KNCITSIYFD L

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..561] PSI-BLAST 170.0 5-EPI-ARISTOLOCHENE SYNTHASE FROM NICOTIANA TABACUM

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • catalytic activity
    		•  1.87397377711135 bayes_pls_golite062009
  • transferase activity
    		•  1.34929557841705 bayes_pls_golite062009
  • transferase activity, transferring alkyl or aryl (other than methyl) groups
    		•  1.22586398285056 bayes_pls_golite062009
  • prenyltransferase activity
    		•  0.302854173865421 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.81

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle