YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: VAP31_ARATH

General Information:
Name(s) found: VAP31_ARATH [Swiss-Prot]
Description(s) found:
SHOW ONLY BEST
  • gi|3738316|gb|AAC63657.1| unknown protein [Arabidopsis thaliana] [NCBI NR]
  • pir||E84629 hypothetical protein At2g23830 [imported] - Arabidopsis thaliana [NCBI NR]
  • gi|15224067|ref|NP_179963.1| vesicle-associated membrane protein, putative / VAMP, putative [Arabidopsis thaliana] [NCBI NR]
  • Vesicle-associated protein 3-1 OS=Arabidopsis thaliana GN=PVA31 PE=3 SV=1 [Swiss-Prot]
  • (O82213) At2g23830 protein [athaliana3702.FASTAC.txt]
  • unknown protein [Arabidopsis thaliana]gi|25412162|pir||E84629 hypothetical protein At2g23830 [imported] - Arabidopsis thalianagi|15224067|ref|NP_179963.1| vesicle-associated membrane protein, putative / VAMP, putative [Arabidopsis thaliana] [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 Vesicle-associated membrane protein [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: | vesicle-associated membrane protein, putative / VAMP, putative | chr2:10150726-10151591 FORWARD [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • structural molecule [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • unknown protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: | PapD-like superfamily protein | chr2:10143646-10144511 FORWARD LENGTH=149 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
    • Organism: Arabidopsis thaliana
    Length: 149 amino acids

    Gene Ontology:
    Cellular Component: cellular_component [ND]
    Biological Process: biological_process [ND]
    Molecular Function: structural molecule activity [IEA][ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSNNELLEIE PMYLQFPFEL KKQMSCSLYL TNKTDNNVAF KVKTTNRNNY CVRPNYGLIL  60
   61 PKSTCKVLVT MQAQKEVPSD MQSFEKFMIQ SVLASPGVTA KEVTREMFSK ESGHVVEETK 120
  121 LRVTYVCSTT TNITSSPRTR RGFIFQCFC

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..149] PSI-BLAST 33.0 Solution structure of the MSP domain of mouse VAMP-associated proteinA


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle