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Protein Overview: ALT1_ARATH

General Information:
Name(s) found: ALT1_ARATH [Swiss-Prot]
Description(s) found:
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  • pir||H86473 unknown protein [imported] - Arabidopsis thaliana [NCBI NR]
  • gi|21928063|gb|AAM78060.1| At1g35290/T9I1_6 [Arabidopsis thaliana] [NCBI NR]
  • gi|18399594|ref|NP_564457.1| thioesterase family protein [Arabidopsis thaliana] [NCBI NR]
  • gi|16226641|gb|AAL16221.1|AF428452_1 At1g35290/T9I1_6 [Arabidopsis thaliana] [NCBI NR]
  • gi|12322949|gb|AAG51465.1|AC069160_11 unknown protein [Arabidopsis thaliana] [NCBI NR]
  • Acyl-acyl carrier protein thioesterase ATL1, chloroplastic OS=Arabidopsis thaliana GN=ALT1 PE=1 SV=1 [Swiss-Prot]
  • (Q9C7I5) Hypothetical protein (At1g35290/T9I1_6) [athaliana3702.FASTAC.txt]
  • At1g35290/T9I1_6 [Arabidopsis thaliana]gi|16226641|gb|AAL16221.1| At1g35290/T9I1_6 [Arabidopsis thaliana]gi|25403225|pir||H86473 unknown protein [imported] - Arabidopsis thalianagi|12322949|gb|AAG51465.1| unknown protein [Arabidopsis thaliana]gi|18399 [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 Thioesterase family protein [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: | thioesterase family protein | chr1:12947738-12948756 REVERSE [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • acyl-CoA thioesterase/ catalytic/ hydrolase, acting on ester bonds [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • At1g35290/T9I1_6 [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • unknown protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: | Thioesterase superfamily protein | chr1:12947760-12948778 REVERSE LENGTH=189 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
  • At1g35290/T9I1_6 OS=Arabidopsis thaliana GN=T9I1.6 PE=2 SV=1 [ARATH-contam.fasta]
    • Organism: Arabidopsis thaliana
    Length: 189 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: biological_process [ND]
    Molecular Function: hydrolase activity, acting on ester bonds [ISS]
    acyl-CoA thioesterase activity [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLKATGTVAP AMHVVFPCFS SRPLILPLRS TKTFKPLSCF KQQGGKGMNG VHEIELKVRD  60
   61 YELDQFGVVN NAVYANYCQH GQHEFMETIG INCDEVSRSG EALAVSELTI KFLAPLRSGC 120
  121 KFVVKTRISG TSMTRIYFEQ FIFKLPNQEP ILEAKGMAVW LDKRYRPVCI PSYIRSNFGH 180
  181 FQRQHVVEY

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..189] PSI-BLAST 25.69897 Hypothetical protein YbaW

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • catalytic activity
    		•  0.350067167618188 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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