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Protein Overview: BH028_ARATH

General Information:
Name(s) found: BH028_ARATH [Swiss-Prot]
Description(s) found:
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  • gi|8809666|dbj|BAA97217.1| bHLH transcription factor [Arabidopsis thaliana] [NCBI NR]
  • gi|75311597|sp|Q9LUK7.1|BH028_ARATH RecName: Full=Transcription factor bHLH28; AltName: Full=Transcription factor EN 40; AltName: Full=bHLH transcription factor bHLH028; AltName: Full=Basic helix-loop-helix protein 28; Short=bHLH 28; Short=AtbHLH28 [NCBI NR]
  • gi|225879098|dbj|BAH30619.1| hypothetical protein [Arabidopsis thaliana] [NCBI NR]
  • gi|18026976|gb|AAL55721.1|AF252636_1 putative transcription factor bHLH28 [Arabidopsis thaliana] [NCBI NR]
  • gi|15237959|ref|NP_199495.1| basic helix-loop-helix (bHLH) family protein [Arabidopsis thaliana] [NCBI NR]
  • Transcription factor bHLH28 OS=Arabidopsis thaliana GN=BHLH28 PE=2 SV=1 [Swiss-Prot]
  • (Q9LUK7) BHLH transcription factor (Putative transcription factor bHLH28) [athaliana3702.FASTAC.txt]
  • bHLH transcription factor [Arabidopsis thaliana]gi|18026976|gb|AAL55721.1| putative transcription factor bHLH28 [Arabidopsis thaliana]gi|15237959|ref|NP_199495.1| basic helix-loop-helix (bHLH) family protein [Arabidopsis thaliana] [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 Basic helix-loop-helix (bHLH) family protein [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: | basic helix-loop-helix (bHLH) family protein | chr5:19019946-19021481 FORWARD [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • putative transcription factor bHLH28 [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • bHLH transcription factor [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • DNA binding / transcription factor [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: ATNIG1, NIG1 | NACL-inducible gene 1 | chr5:19002719-19004254 FORWARD LENGTH=511 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
    • Organism: Arabidopsis thaliana
    Length: 511 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IDA]
    Biological Process: hyperosmotic salinity response [IMP]
    response to salt stress [IEP]
    regulation of transcription [TAS]
    Molecular Function: DNA binding [IDA][ISS]
    transcription factor activity [ISS][TAS]
    calcium ion binding [IDA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MINTDDNLLM IEALLTSDPS PPLLPANLSL ETTLPKRLHA VLNGTHEPWS YAIFWKPSYD  60
   61 DFSGEAVLKW GDGVYTGGNE EKTRGRLRRK KTILSSPEEK ERRSNVIREL NLMISGEAFP 120
  121 VVEDDVSDDD DVEVTDMEWF FLVSMTWSFG NGSGLAGKAF ASYNPVLVTG SDLIYGSGCD 180
  181 RAKQGGDVGL QTILCIPSHN GVLELASTEE IRPNSDLFNR IRFLFGGSKY FSGAPNSNSE 240
  241 LFPFQLESSC SSTVTGNPNP SPVYLQNRYN LNFSTSSSTL ARAPCGDVLS FGENVKQSFE 300
  301 NRNPNTYSDQ IQNVVPHATV MLEKKKGKKR GRKPAHGRDK PLNHVEAERM RREKLNHRFY 360
  361 ALRAVVPNVS KMDKTSLLED AVCYINELKS KAENVELEKH AIEIQFNELK EIAGQRNAIP 420
  421 SVCKYEEKAS EMMKIEVKIM ESDDAMVRVE SRKDHHPGAR LMNALMDLEL EVNHASISVM 480
  481 NDLMIQQANV KMGLRIYKQE ELRDLLMSKI S

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..87] MSA 2.076989 View MSA. No confident structure predictions are available.
    2 View Details [88..231] FFAS03 1.2 Crystal structure of an hypothetical protein
    3 View Details [232..330] deduced N/A No confident structure predictions are available.
    4 View Details [331..423] PSI-BLAST 14.0 Myc prot-oncogene protein
    5 View Details [424..511] FFAS03 0.995 No description for 2nyiA was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.97

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle