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Protein Overview: gi|25407139, gi|...

General Information:
Name(s) found: gi|7268577 [NCBI NR]
gi|4558562 [NCBI NR]
gi|25407139 [NCBI NR]
gi|15234363 [NCBI NR]
Description(s) found:
Found 12 descriptions.
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  • gi|7268577|emb|CAB80686.1| putative CHP-rich zinc finger protein [Arabidopsis thaliana] [NCBI NR]
  • gi|4558562|gb|AAD22655.1|AC007138_19 putative CHP-rich zinc finger protein [Arabidopsis thaliana] [NCBI NR]
  • pir||G85024 probable CHP-rich zinc finger protein [imported] - Arabidopsis thaliana [NCBI NR]
  • gi|15234363|ref|NP_192102.1| DC1 domain-containing protein [Arabidopsis thaliana] [NCBI NR]
    • Organism: Arabidopsis thaliana
    Length: 652 amino acids

    Gene Ontology:
    Cellular Component: cellular_component [ND]
    Biological Process: intracellular signaling pathway [IEA]
    Molecular Function: zinc ion binding [IEA]
    protein binding [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDSEGVSLPL IHKHHMLPWN DMRKGDCCRR FEAISDGYYC KTCDFFVHKS CGDRSSEYIE  60
   61 HPSHPSHALQ LLRKPGHTRN CNLCGISIKS LFYNCEICNF NVHMYCAKYP PPQVIDISET 120
  121 HHHKLNLYKK PNYIDCGDKC GKLSYEFSYK CQECDLAFHV DCAWRPSESN LPLEVNHFYH 180
  181 SLHPLKLVRG KLPDYSDRKC RLCGRYIGDR LFYHCSSCNF TLDMRCVLNP PQQSLLNLKA 240
  241 HDHQLTLLPR LDSFTCNACG LKGDRSPYVC FQCGFMIHQD CLDLPRVINI NRHDHRVSRT 300
  301 SVLGVVKSVC GVCHQKVDWT CGGFSCQRCH GYVVHSKCAT RKDVWNGKEL EGVPEETEDI 360
  361 QPYVVIDENT IQHFSHKEHY LRLHVNGVLC DDNKWCSACT HPICLQSFYG CMDCDFILHQ 420
  421 NCAGFRRMKW HVLHNERLTL VINEAEPFRC YACDRWSNGF RYHQGNITFD VRCGSIAEPF 480
  481 LHPSHPDHPL YHTLPDGGIK ICNGCKNGFY DVLGCIEDDC RFAICFKCAT FPQVVKHRVD 540
  541 DHPLSLCYGE KASGKYWCDI CEKETNPEIW FYTCKDYQAS LHIECVVGAL SLLMPRSTIN 600
  601 PWEKSYEVVL NNSASRPFCS YCELRCIFPI ILKRLGSSDN YVCSYFCALF CI

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..76] FFAS03 1.1 Solution Structure of The C1 Domain of The Human Diacylglycerol Kinase Delta
    2 View Details [77..130] PSI-BLAST 3.69897 NMR STRUCTURE OF A PROTEIN KINASE C-G PHORBOL-BINDING DOMAIN, MINIMIZED AVERAGE STRUCTURE
    3 View Details [131..190] FFAS03 2.0 Solution Structure of DC1 Domain of PDI-like Hypothetical Protein from Arabidopsis thaliana
    4 View Details [191..258] PSI-BLAST 4.0 Crystal Structure of the Human Beta2-Chimaerin
    5 View Details [259..339] deduced N/A Confident ab initio structure predictions are available.
    6 View Details [340..473] MSA 2.342996 View MSA. No confident structure predictions are available.
    7 View Details [474..652] PSI-BLAST 3.522879 Solution Structure of DC1 Domain of PDI-like Hypothetical Protein from Arabidopsis thaliana


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle