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Protein Overview: gi|8978347, gi|1...

General Information:
Name(s) found: gi|8978347 [NCBI NR]
gi|15239928 [NCBI NR]
Description(s) found:
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  • gi|8978347|dbj|BAA98200.1| cell division related protein-like [Arabidopsis thaliana] [NCBI NR]
  • gi|15239928|ref|NP_196229.1| DNAJ heat shock N-terminal domain-containing protein / cell division protein-related [Arabidopsis thaliana] [NCBI NR]
  • (Q9LHS5) Cell division related protein-like [athaliana3702.FASTAC.txt]
  • cell division related protein-like [Arabidopsis thaliana]gi|15239928|ref|NP_196229.1| DNAJ heat shock N-terminal domain-containing protein / cell division protein-related [Arabidopsis thaliana] [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 DNAJ heat shock N-terminal domain-containing protein [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: | DNAJ heat shock N-terminal domain-containing protein / cell division protein-related | chr5:1841010-1843001 REVERSE [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • DNA binding / heat shock protein binding / unfolded protein binding [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • cell division related protein-like [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: | DnaJ domain ;Myb-like DNA-binding domain | chr5:1841009-1843000 REVERSE LENGTH=663 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
  • Cell division related protein-like OS=Arabidopsis thaliana GN=At5g06110 PE=4 SV=1 [ARATH-contam.fasta]
    • Organism: Arabidopsis thaliana
    Length: 663 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: protein folding [ISS]
    Molecular Function: heat shock protein binding [IEA]
    DNA binding [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQSWGINSAI KLLTYSSELK DGQALYASSN CHPVKALNRE PAGHAFHSAA LKLRGCAKEA  60
   61 TSKNEDTDKK VPKEKDGEYI PSYDSHNIKG KKKSGKLQHD HYALLGLGNL RYLATDDQIR 120
  121 KSYRDAALKH HPDKLATLLL LEETEEAKQA KKDEIESHFK LIQEAYEVLM DSTKRRIFDS 180
  181 TDEFDDKVPT DCAPQDFFKV FGPAFKRNAR WSNSPLPDLG DENTPLKEVD RFYSTWYTFK 240
  241 SWREFPEEEE HDIEQAESRE EKRWMERENA RKTQKARKEE YARIRTLVDN AYKKDIRIQK 300
  301 RKDDEKAKKL QKKEAKVMAK RQQEEAAAAA IEEEKRRKEE EAKRAAEAAQ LHKRAKEREK 360
  361 KLLRKERSRL RVLSAPVLSQ RLLGISDEHV EDLCMSLNTE QLRKLCDKME NKEGMALAKV 420
  421 IKNGSNIDDD KIEIEEEEVQ VAVKQNGHIE ANGHVEANGH VEAKVDTATH EKKEKPWSKE 480
  481 EIDMLRKGTT KFPKGTSQRW EVISEYIGTG RSVEEILKAT KTVLLQKPDS AKAFDSFLEN 540
  541 RKPAASINSP LSTREELGEP IIPTKAHEDN NSTKTETAEQ NGKTKENNNS NGNSEPAAAS 600
  601 GSDPDGWSAV QERALVQALK TFPKETNQRW ERVATAVPGK TMNQCKKKFA DLKDVIRTKK 660
  661 PTA

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..192] PSI-BLAST 3.154902 No description for 2i1jA was found.
    2 View Details [193..573] PSI-BLAST 13.0 Heavy meromyosin subfragment
    3 View Details [574..663] PSI-BLAST 5.522879 Tropomyosin


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle