YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: HPSE1_ARATH

General Information:
Name(s) found: HPSE1_ARATH [Swiss-Prot]
Description(s) found:
Found 15 descriptions.
SHOW ALL
  • Heparanase-like protein 1 OS=Arabidopsis thaliana GN=At5g07830 PE=2 SV=1 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 543 amino acids

    Gene Ontology:
    Cellular Component: cell wall [IDA]
    plant-type cell wall [IDA]
    Biological Process: NONE FOUND
    Molecular Function: beta-glucuronidase activity [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGFRVCVIVV FLGCLLLVPE KTMAQEMKRA SIVIQGARRV CETDENFVCA TLDWWPHDKC  60
   61 NYDQCPWGYS SVINMDLTRP LLTKAIKAFK PLRIRIGGSL QDQVIYDVGN LKTPCRPFQK 120
  121 MNSGLFGFSK GCLHMKRWDE LNSFLTATGA VVTFGLNALR GRHKLRGKAW GGAWDHINTQ 180
  181 DFLNYTVSKG YVIDSWEFGN ELSGSGVGAS VSAELYGKDL IVLKDVINKV YKNSWLHKPI 240
  241 LVAPGGFYEQ QWYTKLLEIS GPSVVDVVTH HIYNLGSGND PALVKKIMDP SYLSQVSKTF 300
  301 KDVNQTIQEH GPWASPWVGE SGGAYNSGGR HVSDTFIDSF WYLDQLGMSA RHNTKVYCRQ 360
  361 TLVGGFYGLL EKGTFVPNPD YYSALLWHRL MGKGVLAVQT DGPPQLRVYA HCSKGRAGVT 420
  421 LLLINLSNQS DFTVSVSNGI NVVLNAESRK KKSLLDTLKR PFSWIGSKAS DGYLNREEYH 480
  481 LTPENGVLRS KTMVLNGKSL KPTATGDIPS LEPVLRSVNS PLNVLPLSMS FIVLPNFDAS 540
  541 ACS

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..543] PSI-BLAST 85.0 Crystal structure of a family 51 (GH51) alpha-L-arabinofuranosidase from Geobacillus stearothermophilus T6

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • hydrolase activity, acting on glycosyl bonds
    		•  1.61018593762156 bayes_pls_golite062009
  • hydrolase activity, hydrolyzing O-glycosyl compounds
    		•  1.5392176137631 bayes_pls_golite062009
  • hydrolase activity
    		•  1.17820019875476 bayes_pls_golite062009
  • catalytic activity
    		•  0.95519213931595 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle