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Protein Overview: gi|15228885, gi|...

General Information:
Name(s) found: gi|15228885 [NCBI NR]
gi|11994715 [NCBI NR]
Description(s) found:
Found 8 descriptions.
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  • gi|15228885|ref|NP_188926.1| TIF3C2 (eukaryotic translation initiation factor 3 subunit C2); translation initiation factor [Arabidopsis thaliana] [NCBI NR]
  • gi|11994715|dbj|BAB03031.1| eukaryotic translation initiation factor 3 subunit 8-like protein [Arabidopsis thaliana] [NCBI NR]
    • Organism: Arabidopsis thaliana
    Length: 800 amino acids

    Gene Ontology:
    Cellular Component: eukaryotic translation initiation factor 3 complex [IEA][ISS]
    Biological Process: translational initiation [IEA][ISS]
    Molecular Function: translation initiation factor activity [IEA][ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFRLQSGSES EDESDFEKEE VEGNNTRYLA DLPDGEICCG MDTKRVVKPK KDKRFEEMAN  60
   61 TIENMKHAMN INDCVYLQET FEKLNKQISK SVKTPTLYIK TLVMLEDFLN EDNMKTKEKM 120
  121 STSNSKALNA MRQKLKKNNL QYQEDIKRFR ESPEIEDDDE YEEEVVEDSA DNVSWEMLFS 180
  181 LDHEEITWNM VNKKFKEIRA ARWSKRRSSS LKLKPGETHA QKHMDLTKIA KTPAQKVEIL 240
  241 FSVISAEFNV NSGGLSGYMP IDVWKKCVVN MLTILDILVK YYNIVVDDTV EPDEKETSKP 300
  301 AAYDGTIRVS GNLVAFLEKI ETEFFKSLQC IDPHTNDYVE RLKDEPMFLA LAQSIQDYLE 360
  361 RTGDSKAASK VAFILVESIY YKPQEVFDAM SKLADEEIEE ANEESGSSSS SFIVVAEIVP 420
  421 RKPTFAKSSR AMMDTLVSFI YKNGDERTKA RAMLCDIYQH ALMDNFVTAR DLLLMSHLQE 480
  481 NIQHMDISTQ ILFNRTMAQL GLCAFRVGMI TESHSCLSEL YSGNRVRELL GQGVSQSRDH 540
  541 EKTTEQMLME RRTQIPYHMN INLELLEAVY LTCAMLLEVP NMAANSHDSK HKPISKNIQR 600
  601 LLEKSEKQAF TAPPENVRVH VIAATRALIK GNFQEAFSVL NSLDIWRLFK NRDSILDMVK 660
  661 ASISEVALRT YLFTYSSSCY KSLSLAELAK MFDISESHVY SIVSKMMINK ELNATWDQPT 720
  721 QCIVFHEVQH NRAQSLAFQI TEKLATLAES NESAMESKTG GVGLDMTSRR RENSQDYAAA 780
  781 ASDNRGLKMD GSSLTRGVSA

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..206] MSA 6.043988 View MSA. No confident structure predictions are available.
    2 View Details [207..380] MSA 1.043964 View MSA. No confident structure predictions are available.
    3 View Details [381..485] deduced N/A Confident ab initio structure predictions are available.
    4 View Details [486..604] MSA 1.049953 View MSA. No confident structure predictions are available.
    5 View Details [605..729] FFAS03 2.15 Solution structure of the PCI domain
    6 View Details [730..800] Pfam 15.346787 No description for PF05469.2 was found. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle