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Protein Overview: gi|18175601, gi|...

General Information:
Name(s) found: gi|22136850 [NCBI NR]
gi|18420811 [NCBI NR]
gi|18175601 [NCBI NR]
gi|10177858 [NCBI NR]
Description(s) found:
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  • gi|22136850|gb|AAM91769.1| unknown protein [Arabidopsis thaliana] [NCBI NR]
  • gi|18420811|ref|NP_568449.1| copper-binding family protein [Arabidopsis thaliana] [NCBI NR]
  • gi|18175601|gb|AAL59894.1| unknown protein [Arabidopsis thaliana] [NCBI NR]
  • gi|10177858|dbj|BAB11210.1| unnamed protein product [Arabidopsis thaliana] [NCBI NR]
  • (Q9FLU5) Genomic DNA, chromosome 5, TAC clone:K18P6 (Hypothetical protein) [athaliana3702.FASTAC.txt]
  • unknown protein [Arabidopsis thaliana]gi|18175601|gb|AAL59894.1| unknown protein [Arabidopsis thaliana]gi|10177858|dbj|BAB11210.1| unnamed protein product [Arabidopsis thaliana]gi|18420811|ref|NP_568449.1| copper-binding family protein [Arabidopsis tha [nrdb_11152004_Chlamydomonas]
  • | Symbols: | copper-binding family protein | chr5:8410397-8412090 REVERSE [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • unnamed protein product [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • unknown protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • copper ion binding / metal ion binding [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: | Heavy metal transport/detoxification superfamily protein | chr5:8410394-8412087 REVERSE LENGTH=319 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
  • Heavy metal transport/detoxification domain-containing protein OS=Arabidopsis thaliana GN=At5g24580 PE=2 SV=1 [ARATH-contam.fasta]
    • Organism: Arabidopsis thaliana
    Length: 319 amino acids

    Gene Ontology:
    Cellular Component: cellular_component [ND]
    Biological Process: copper ion transport [ISS]
    metal ion transport [IEA]
    Molecular Function: copper ion binding [ISS]
    metal ion binding [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGEEVKPEAK EAASAPQAVP AEEEEKKKDV AEEKKVAAEE EKPKEEEEPQ PPPPPPPFIL  60
   61 YVDLHCVGCA KKIERSILKI RGVEEVVMDM NENQVTIKGV LDPQAVCNKI KKKTKRMAKV 120
  121 LSPLPAAEGE PLPPIITSQV SGGLTTVELS VNMHCQACAD QLKKKILKMR GVQTTVTEHT 180
  181 TGKVIVTGTM DAEKLVDYVY RRTKKQARIV PQPDPEPEAP AAAQEEKKEE SGEGNEKPPE 240
  241 TGEEKEEEKK KEGEENGEEG GGEEAAATEE ERRDNEMTAM AQEEGMKRMM YYYQPSYVIE 300
  301 RIPPPQLFSD ENPNACCIS

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..227] PSI-BLAST 23.522879 No description for 2ew9A was found.
    2 View Details [228..319] FFAS03 0.965 No description for 2j63A was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle