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Protein Overview: AFP2_ARATH

General Information:
Name(s) found: AFP2_ARATH [Swiss-Prot]
Description(s) found:
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  • gi|90093290|gb|ABD85158.1| At1g13740 [Arabidopsis thaliana] [NCBI NR]
  • gi|8920578|gb|AAF81300.1|AC027656_17 Strong similarity to a hypothetical protein F23O10.16 gi|7705096 from Arabidopsis thaliana BAC F23O10 gb|AC018364 [NCBI NR]
  • gi|75174856|sp|Q9LMX5.1|U7372_ARATH RecName: Full=UPF0737 protein AFP2; AltName: Full=ABI five-binding protein 2; Short=ABI5-binding protein 2 [NCBI NR]
  • pir||G86270 hypothetical protein F21F23.17 - Arabidopsis thaliana [NCBI NR]
  • gi|18394031|ref|NP_563933.1| AFP2 (ABI FIVE BINDING PROTEIN 2) [Arabidopsis thaliana] [NCBI NR]
  • UPF0737 protein AFP2 OS=Arabidopsis thaliana GN=AFP2 PE=1 SV=1 [Swiss-Prot]
  • Ninja-family protein AFP2 OS=Arabidopsis thaliana GN=AFP2 PE=1 SV=1 [Swiss-Prot]
  • (Q9LMX5) F21F23.17 protein [athaliana3702.FASTAC.txt]
  • hypothetical protein F21F23.17 - Arabidopsis thalianagi|18394031|ref|NP_563933.1| expressed protein [Arabidopsis thaliana]gi|8920578|gb|AAF81300.1| Strong similarity to a hypothetical protein F23O10.16 gi|7705096 from Arabidopsis thaliana BAC F23O10 gb| [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 Expressed protein [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: | similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G69260.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO41856.1); contains InterPro domain Protein of unknown function DUF1675 (InterPro:IPR012463) | chr1:4713966-47151 [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • At1g13740 [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • unknown protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • Strong similarity to a hypothetical protein F23O10.16 gi|7705096 from Arabidopsis thaliana BAC F23O10 gb|AC018364 [nr-271106-contam.fasta]
  • | Symbols: | similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G69260.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO41856.1); contains InterPro domain Protein of unknown function DUF1675 (InterPro:IPR012463) | chr1:4713966-4715155 FORWARD [TAIR_A_Thaliana_na_04-12-2008_reversed.fasta]
  • | Symbols: AFP2 | ABI five binding protein 2 | chr1:4713969-4715158 FORWARD LENGTH=348 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
    • Organism: Arabidopsis thaliana
    Length: 348 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IDA]
    Biological Process: response to abscisic acid stimulus [IMP]
    response to stress [IMP]
    Molecular Function: protein binding [IPI]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGEASRQQRA WNREMTVTTN LSLDIDKYPR DLLRGFMSEN GGGRVFHGGE TNCDDESTIE  60
   61 LNLGLSLGGR FGVDKTPRKL KRSSSVLDTV PFNDSTVAEP ENYTVGLERT TSLPAEMEEE 120
  121 WRKRKEMQSL RRMEAKRRRC EKQSFRVGNS DDQTVSFENE RWVTASKSGF LQRHLVSSNR 180
  181 QVCGVDSDGG GATGGGSSSS LSELDNKNQQ GSSNSCNDER SPKIVAGCSS NSGSQGTERP 240
  241 SVTRANKVNE NENEKRVRSE DSVDRKGKGM ATSTGLVDMP CVFTKGDGPN GRRVDGILYK 300
  301 YGKGEEVRIM CICHGSFLTP AEFVKHGGGG DVDRPLRHIV VNTSSSTF

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..203] MSA 1.012968 View MSA. No confident structure predictions are available.
    2 View Details [204..348] MSA 4.014973 View MSA. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle