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Protein Overview: AFP2_ARATH

General Information:
Name(s) found: AFP2_ARATH [Swiss-Prot]
Description(s) found:
Found 16 descriptions.
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  • Ninja-family protein AFP2 OS=Arabidopsis thaliana GN=AFP2 PE=1 SV=1 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 348 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IDA]
    Biological Process: response to abscisic acid stimulus [IMP]
    response to stress [IMP]
    Molecular Function: protein binding [IPI]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGEASRQQRA WNREMTVTTN LSLDIDKYPR DLLRGFMSEN GGGRVFHGGE TNCDDESTIE  60
   61 LNLGLSLGGR FGVDKTPRKL KRSSSVLDTV PFNDSTVAEP ENYTVGLERT TSLPAEMEEE 120
  121 WRKRKEMQSL RRMEAKRRRC EKQSFRVGNS DDQTVSFENE RWVTASKSGF LQRHLVSSNR 180
  181 QVCGVDSDGG GATGGGSSSS LSELDNKNQQ GSSNSCNDER SPKIVAGCSS NSGSQGTERP 240
  241 SVTRANKVNE NENEKRVRSE DSVDRKGKGM ATSTGLVDMP CVFTKGDGPN GRRVDGILYK 300
  301 YGKGEEVRIM CICHGSFLTP AEFVKHGGGG DVDRPLRHIV VNTSSSTF

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..203] MSA 1.012968 View MSA. No confident structure predictions are available.
    2 View Details [204..348] MSA 4.014973 View MSA. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle