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Protein Overview: DABB1_ARATH

General Information:
Name(s) found: DABB1_ARATH [Swiss-Prot]
Description(s) found:
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  • gi|51971927|dbj|BAD44628.1| unknown protein [Arabidopsis thaliana] [NCBI NR]
  • gi|51968800|dbj|BAD43092.1| unknown protein [Arabidopsis thaliana] [NCBI NR]
  • gi|4836945|gb|AAD30647.1|AC006085_20 Unknown protein [Arabidopsis thaliana] [NCBI NR]
  • gi|34365597|gb|AAQ65110.1| At1g51360 [Arabidopsis thaliana] [NCBI NR]
  • pir||F96551 hypothetical protein F11M15.22 [imported] - Arabidopsis thaliana [NCBI NR]
  • gi|15223825|ref|NP_175547.1| DABB1 (DIMERIC A/B BARREL DOMAINS-PROTEIN 1) [Arabidopsis thaliana] [NCBI NR]
  • Stress-response A/B barrel domain-containing protein DABB1 OS=Arabidopsis thaliana GN=DABB1 PE=1 SV=1 [Swiss-Prot]
  • (Q9SYD8) F11M15.22 protein [athaliana3702.FASTAC.txt]
  • At1g51360 [Arabidopsis thaliana]gi|51971927|dbj|BAD44628.1| unknown protein [Arabidopsis thaliana]gi|51968800|dbj|BAD43092.1| unknown protein [Arabidopsis thaliana]gi|25405459|pir||F96551 hypothetical protein F11M15.22 [imported] - Arabidopsis thaliana [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 Expressed protein [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: | similar to unknown protein [Arabidopsis thaliana] (TAIR:AT2G31670.1); similar to unknown [Populus trichocarpa] (GB:ABK93857.1); contains InterPro domain Dimeric alpha-beta barrel (InterPro:IPR011008); contains InterPro domain Stress responsi [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • unknown protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • Unknown protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • At1g51360 [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: | similar to unknown protein [Arabidopsis thaliana] (TAIR:AT2G31670.1); similar to unknown [Populus trichocarpa] (GB:ABK93857.1); contains InterPro domain Dimeric alpha-beta barrel (InterPro:IPR011008); contains InterPro domain Stress responsive alpha-beta barrel (InterPro:IPR013097) | chr1:19047876-19048508 FORWARD [TAIR_A_Thaliana_na_04-12-2008_reversed.fasta]
  • | Symbols: ATDABB1, DABB1 | dimeric A/B barrel domainS-protein 1 | chr1:19044208-19044840 FORWARD LENGTH=210 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
  • At1g51360 OS=Arabidopsis thaliana GN=F11M15.22 PE=2 SV=1 [ARATH-contam.fasta]
    • Organism: Arabidopsis thaliana
    Length: 210 amino acids

    Gene Ontology:
    Cellular Component: cytosol [IDA]
    Biological Process: defense response to fungus, incompatible interaction [IDA]
    response to jasmonic acid stimulus [IEP]
    response to fungus [IEP]
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSSIVEHVVL FKLNDDDVDS GKINSMVNGI NELVNLDQVL HLYCGSIHRL ITTTASDFTH  60
   61 VLHSRYRSKE DLNAYAIHPD HVRVVKESES IREDIMAVDW IAEQAPEALA PPLGSIGKIT 120
  121 LLKLKENVME EAKLEIMEVM KEKFEGIDQI TVGENFSPGR SKDFSIGSIS YFRDLGEIEA 180
  181 VDDQMKLQND KIRDYVDDTI VVEFNVPSSS

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..104] PSI-BLAST 23.69897 Gene Product of At3g17210 from Arabidopsis Thaliana
    2 View Details [105..210] FFAS03 2.26 Gene Product of At3g17210 from Arabidopsis Thaliana


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle