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Protein Overview: gi|186514102, gi...

General Information:
Name(s) found: gi|7484877 [NCBI NR]
gi|7269597 [NCBI NR]
gi|4972068 [NCBI NR]
gi|3327868 [NCBI NR]
gi|186514102 [NCBI NR]
gi|15234126 [NCBI NR]
Description(s) found:
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  • pir||T08935 COP1-interacting protein 7 - Arabidopsis thaliana [NCBI NR]
  • gi|7269597|emb|CAB81393.1| COP1-interacting protein 7 (CIP7) [Arabidopsis thaliana] [NCBI NR]
  • gi|4972068|emb|CAB43875.1| COP1-interacting protein 7 (CIP7) [Arabidopsis thaliana] [NCBI NR]
  • gi|3327868|dbj|BAA31738.1| COP1-Interacting Protein 7 (CIP7) [Arabidopsis thaliana] [NCBI NR]
  • gi|186514102|ref|NP_001119068.1| CIP7 (COP1-INTERACTING PROTEIN 7); transcription activator [Arabidopsis thaliana] [NCBI NR]
  • gi|15234126|ref|NP_194473.1| CIP7 (COP1-INTERACTING PROTEIN 7); transcription activator [Arabidopsis thaliana] [NCBI NR]
  • (O80386) COP1-interacting PROTEIN 7 (CIP7) (COP1-interacting PROTEINI 7) [athaliana3702.FASTAC.txt]
  • COP1-Interacting Protein 7 (CIP7) [Arabidopsis thaliana]gi|7269597|emb|CAB81393.1| COP1-interacting protein 7 (CIP7) [Arabidopsis thaliana]gi|4972068|emb|CAB43875.1| COP1-interacting protein 7 (CIP7) [Arabidopsis thaliana]gi|7484877|pir||T08935 COP1-in [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 COP1-interacting protein 7 (CIP7) [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: CIP7 | CIP7 (COP1-INTERACTING PROTEIN 7) | chr4:13718823-13722742 FORWARD [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • CIP7 (COP1-INTERACTING PROTEIN 7) [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • COP1-interacting protein 7 (CIP7) [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • COP1-Interacting Protein 7 (CIP7) [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: CIP7 | COP1-interacting protein 7 | chr4:13718817-13722736 FORWARD LENGTH=1058 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
  • COP1-Interacting Protein 7 (CIP7) OS=Arabidopsis thaliana GN=CIP7 PE=2 SV=1 [ARATH-contam.fasta]
  • COP1-Interacting Protein 7 (CIP7) OS=Arabidopsis thaliana GN=CIP7 PE=1 SV=1 [ARATH.fasta.20160308]
    • Organism: Arabidopsis thaliana
    Length: 1058 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IDA]
    plasma membrane [IDA]
    Biological Process: anthocyanin biosynthetic process [IDA]
    chlorophyll biosynthetic process [IDA]
    response to light stimulus [IEP]
    Molecular Function: transcription activator activity [IGI]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDPRTRLDYA LFQLTPTRTR CDLVIFSGGE NEKLASGIFQ PFVTHLKSVS DQISKGGYSV  60
   61 TLRPSSVGVP WFTKVTLQRF VRFVTTPEVL ERSVTLEKEI EQIEDSIQAN AAAIAGEAEG 120
  121 NELGGTWTSQ KSTALSKTKG ETDGDTVEEN SKVGLQRVLE NRKAALCKEQ AMAYARALVV 180
  181 GFELDYMDDL FSFADAFGAS RLREACVNFV DLCKRKNEDR MWVDQITAMQ AFPRPELTFM 240
  241 GDSGIVLAGE ENDLLNATNV KHGNSMDASS QGSFETGQEG RAQMAMPWPN QFPQYMQNFQ 300
  301 GHGYPPPYMF PGMQGQSPYF HGNMQWPVNM GDVESNEKSS KKKKKKKKNK KKSKQDESAE 360
  361 PSDNSSTETE SEDGNEGKKQ SRKVVIRNIN YITSKRNGAK ESDSDESGEE EGFVDGDSIK 420
  421 QQVEEAIGSV ERRHKSTSHR QRKHKSHNGD DDSSNKETKG NDNWDAFQNL LLKDNDSEPE 480
  481 ELLRISSTAL NMASEVVRKR EPPSDDSFLV AIGNEDWGRE TSIEKFNAGE NVRIIRKGNN 540
  541 YDEEMLNPGR SDESRSYSQA EMSVHDGKLR TRNEAEEDWF IRNQAGPETD PSLVKTFVGD 600
  601 HFHLNKSSER DVLTDDSFMI HSRVENQVED SRLRTEIMDL DVYGTTQQEN SAPENTPHEP 660
  661 DDLYMVLGRE QDVKPTLLPW TPEIDFETNT LAQRTSRIDL ITATKASAGE QTLDGKEKKS 720
  721 RGISKGKDAK SRASSRPDPA SKAKRPAWGS RAAVSKSKSE MEEERKKRME ELLIQRQKRI 780
  781 AEKSSGGSVS SSLASKKTPT VTKSVKSSIK NEKTPEAAQS KAKPVLRSST IERLAVARTA 840
  841 PKEPQQKPVI KRTSKPSGYK TEKAQEKKSS KIGQSDAKSV ELSRDPSLEI KETVVEDSHS 900
  901 YLSEKQVDAL PAVASVDDFK DIKELHSLPS EETARVKNRP NEIIAEKVQD QTKIDDQETV 960
  961 KNTSVSEDKQ ITTKHYSEDV GEVQASQEKP VSPKKSVTFS ETNMEEKYYF SPAVSEIDIS1020
 1021 TPPATEADHS RKKWNSEETS PKATAKVFRK LLMFGRKK

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..102] MSA 1.20798 View MSA. No confident structure predictions are available.
    2 View Details [103..231] deduced N/A No confident structure predictions are available.
    3 View Details [232..364] deduced N/A No confident structure predictions are available.
    4 View Details [365..539] deduced N/A No confident structure predictions are available.
    5 View Details [540..781] deduced N/A No confident structure predictions are available.
    6 View Details [782..855] deduced N/A No confident structure predictions are available.
    7 View Details [856..1058] MSA 2.542997 View MSA. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle