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Protein Overview: gi|21592811, gi|...

General Information:
Name(s) found: gi|6478918 [NCBI NR]
gi|21592811 [NCBI NR]
gi|20259607 [NCBI NR]
gi|18398438 [NCBI NR]
gi|17380786 [NCBI NR]
Description(s) found:
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  • gi|6478918|gb|AAF14023.1|AC011436_7 unknown protein [Arabidopsis thaliana] [NCBI NR]
  • gi|21592811|gb|AAM64760.1| unknown [Arabidopsis thaliana] [NCBI NR]
  • gi|20259607|gb|AAM14160.1| unknown protein [Arabidopsis thaliana] [NCBI NR]
  • gi|18398438|ref|NP_566347.1| DNA binding / nuclease [Arabidopsis thaliana] [NCBI NR]
  • gi|17380786|gb|AAL36223.1| unknown protein [Arabidopsis thaliana] [NCBI NR]
  • (Q9SR38) F3L24.12 protein (Hypothetical protein) [athaliana3702.FASTAC.txt]
  • unknown protein [Arabidopsis thaliana]gi|21592811|gb|AAM64760.1| unknown [Arabidopsis thaliana]gi|20259607|gb|AAM14160.1| unknown protein [Arabidopsis thaliana]gi|17380786|gb|AAL36223.1| unknown protein [Arabidopsis thaliana]gi|18398438|ref|NP_566347. [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 Expressed protein [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: | DNA binding / nuclease | chr3:2839086-2840300 FORWARD [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • unknown protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • unknown [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: | Nuclear transport factor 2 (NTF2) family protein | chr3:2839080-2840294 FORWARD LENGTH=244 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
  • F3L24.12 protein OS=Arabidopsis thaliana GN=F3L24.12 PE=2 SV=1 [ARATH-contam.fasta]
  • Isoform of F4IZV9, F3L24.12 protein OS=Arabidopsis thaliana GN=F3L24.12 PE=2 SV=1 [ARATH.fasta.20160308]
    • Organism: Arabidopsis thaliana
    Length: 244 amino acids

    Gene Ontology:
    Cellular Component: chloroplast [IDA]
    Biological Process: nucleotide-excision repair [IEA]
    Molecular Function: DNA binding [IEA]
    nuclease activity [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MALHGSGVFC KVSNMVEITS PFGGSMRLLH LPKSYPIHCN MVSASNTFGS AHLKLQNKEP  60
   61 CSRLRPCRVK REENNQTADV ESISMDENTL KQDLETAVQE ENYVEAAKIR DKLKELQEDN 120
  121 KASVLSANSR FYQSFRNGDL AAMQSLWSKS GNPCCVHPGA KGITGYDYVM ESWELVWMNY 180
  181 EFPLLIELKD VEVHVRGEVG YVTCMEFVKT KGSSSWGAQF VSNVFERIDG QWFICIHHAS 240
  241 PVDI

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..100] PSI-BLAST 14.69897 Crystal Structure of the Auto-Inhibited Kinase Domain of Calcium/Calmodulin Activated Kinase II
    2 View Details [101..244] PSI-BLAST 43.0 Association donain of calcium/calmodulin-dependent protein kinase type II alpha subunit, CAMK2A


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.97

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle