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Protein Overview: WRK23_ARATH

General Information:
Name(s) found: WRK23_ARATH [Swiss-Prot]
Description(s) found:
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  • gi|30017307|gb|AAP12887.1| At2g47260 [Arabidopsis thaliana] [NCBI NR]
  • gi|29839448|sp|O22900.1|WRK23_ARATH RecName: Full=Probable WRKY transcription factor 23; AltName: Full=WRKY DNA-binding protein 23 [NCBI NR]
  • gi|26450898|dbj|BAC42556.1| putative WRKY-type DNA binding protein [Arabidopsis thaliana] [NCBI NR]
  • pir||A84913 probable WRKY-type DNA binding protein [imported] - Arabidopsis thaliana [NCBI NR]
  • gi|2275204|gb|AAB63826.1| putative WRKY-type DNA binding protein [Arabidopsis thaliana] [NCBI NR]
  • gi|15990584|gb|AAL11008.1| WRKY transcription factor 23 [Arabidopsis thaliana] [NCBI NR]
  • gi|15226550|ref|NP_182248.1| WRKY23; transcription factor [Arabidopsis thaliana] [NCBI NR]
  • Probable WRKY transcription factor 23 OS=Arabidopsis thaliana GN=WRKY23 PE=2 SV=1 [Swiss-Prot]
  • (O22900) Probable WRKY transcription factor 23 (WRKY DNA-binding protein 23) [Swiss-Prot]
  • At2g47260 [Arabidopsis thaliana]gi|26450898|dbj|BAC42556.1| putative WRKY-type DNA binding protein [Arabidopsis thaliana]gi|2275204|gb|AAB63826.1| putative WRKY-type DNA binding protein [Arabidopsis thaliana]gi|15990584|gb|AAL11008.1| WRKY transcriptio [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 Probable WRKY transcription factor 23 [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: ATWRKY23, WRKY23 | WRKY23 (WRKY DNA-binding protein 23); transcription factor | chr2:19412115-19413516 REVERSE [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • putative WRKY-type DNA binding protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • WRKY23; transcription factor [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • WRKY transcription factor 23 [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • Probable WRKY transcription factor 23 (WRKY DNA-binding protein 23) [nr-271106-contam.fasta]
  • At2g47260 [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: WRKY23, ATWRKY23 | WRKY DNA-binding protein 23 | chr2:19405045-19406446 REVERSE LENGTH=337 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
    • Organism: Arabidopsis thaliana
    Length: 337 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IEA]
    Biological Process: regulation of transcription, DNA-dependent [ISS]
    response to nematode [IEP]
    response to auxin stimulus [IEP]
    Molecular Function: transcription factor activity [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEFTDFSKTS FYYPSSQSVW DFGDLAAAER HSLGFMELLS SQQHQDFATV SPHSFLLQTS  60
   61 QPQTQTQPSA KLSSSIIQAP PSEQLVTSKV ESLCSDHLLI NPPATPNSSS ISSASSEALN 120
  121 EEKPKTEDNE EEGGEDQQEK SHTKKQLKAK KNNQKRQREA RVAFMTKSEV DHLEDGYRWR 180
  181 KYGQKAVKNS PFPRSYYRCT TASCNVKKRV ERSFRDPSTV VTTYEGQHTH ISPLTSRPIS 240
  241 TGGFFGSSGA ASSLGNGCFG FPIDGSTLIS PQFQQLVQYH HQQQQQELMS CFGGVNEYLN 300
  301 SHANEYGDDN RVKKSRVLVK DNGLLQDVVP SHMLKEE

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..145] MSA 1.279991 View MSA. No confident structure predictions are available.
    2 View Details [146..242] PSI-BLAST 30.221849 Solution Structure of the C-terminal WRKY Domain of AtWRKY4
    3 View Details [243..337] deduced N/A No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.82

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle