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Protein Overview: TGA1_ARATH

General Information:
Name(s) found: TGA1_ARATH [Swiss-Prot]
Description(s) found:
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  • gi|79332396|ref|NP_001032149.1| TGA1; DNA binding / calmodulin binding / transcription factor [Arabidopsis thaliana] [NCBI NR]
  • gi|79332369|ref|NP_001032148.1| TGA1; DNA binding / calmodulin binding / transcription factor [Arabidopsis thaliana] [NCBI NR]
  • gi|79332347|ref|NP_001032147.1| TGA1; DNA binding / calmodulin binding / transcription factor [Arabidopsis thaliana] [NCBI NR]
  • gi|44888359|sp|Q39237.2|TGA1_ARATH RecName: Full=Transcription factor TGA1; AltName: Full=DNA-binding protein TGA1a-like protein; AltName: Full=bZIP transcription factor 47; Short=AtbZIP47 [NCBI NR]
  • gi|30698106|ref|NP_851273.1| TGA1; DNA binding / calmodulin binding / transcription factor [Arabidopsis thaliana] [NCBI NR]
  • gi|222424395|dbj|BAH20153.1| AT5G65210 [Arabidopsis thaliana] [NCBI NR]
  • gi|222423724|dbj|BAH19828.1| AT5G65210 [Arabidopsis thaliana] [NCBI NR]
  • gi|22136320|gb|AAM91238.1| DNA binding protein TGA1a-like protein [Arabidopsis thaliana] [NCBI NR]
  • gi|20466254|gb|AAM20444.1| DNA binding protein TGA1a-like protein [Arabidopsis thaliana] [NCBI NR]
  • gi|15238367|ref|NP_201324.1| TGA1; DNA binding / calmodulin binding / transcription factor [Arabidopsis thaliana] [NCBI NR]
  • gi|10178183|dbj|BAB11657.1| DNA binding protein TGA1a homolog [Arabidopsis thaliana] [NCBI NR]
  • Transcription factor TGA1 OS=Arabidopsis thaliana GN=TGA1 PE=1 SV=2 [Swiss-Prot]
  • (Q39237) Transcription factor TGA1 (DNA binding protein TGA1a-like protein) (AtbZIP47) [athaliana3702.FASTAC.txt]
  • DNA binding protein TGA1a homolog [Arabidopsis thaliana]gi|22136320|gb|AAM91238.1| DNA binding protein TGA1a-like protein [Arabidopsis thaliana]gi|20466254|gb|AAM20444.1| DNA binding protein TGA1a-like protein [Arabidopsis thaliana]gi|44888359|sp|Q3923 [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 Transcription factor TGA1 [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: TGA1 | TGA1; DNA binding / calmodulin binding / transcription factor | chr5:26076257-26077975 FORWARD [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • DNA binding protein TGA1a-like protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • DNA binding / calmodulin binding / transcription factor [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • Transcription factor TGA1 (DNA-binding protein TGA1a-like protein) (AtbZIP47) [nr-271106-contam.fasta]
  • DNA binding protein TGA1a homolog [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: TGA1 | bZIP transcription factor family protein | chr5:26059031-26060749 FORWARD LENGTH=368 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
    • Organism: Arabidopsis thaliana
    Length: 368 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IEA]
    Biological Process: defense response to bacterium [IMP]
    Molecular Function: DNA binding [TAS]
    transcription factor activity [ISS]
    calmodulin binding [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNSTSTHFVP PRRVGIYEPV HQFGMWGESF KSNISNGTMN TPNHIIIPNN QKLDNNVSED  60
   61 TSHGTAGTPH MFDQEASTSR HPDKIQRRLA QNREAARKSR LRKKAYVQQL ETSRLKLIQL 120
  121 EQELDRARQQ GFYVGNGIDT NSLGFSETMN PGIAAFEMEY GHWVEEQNRQ ICELRTVLHG 180
  181 HINDIELRSL VENAMKHYFE LFRMKSSAAK ADVFFVMSGM WRTSAERFFL WIGGFRPSDL 240
  241 LKVLLPHFDV LTDQQLLDVC NLKQSCQQAE DALTQGMEKL QHTLADCVAA GQLGEGSYIP 300
  301 QVNSAMDRLE ALVSFVNQAD HLRHETLQQM YRILTTRQAA RGLLALGEYF QRLRALSSSW 360
  361 ATRHREPT

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..146] PSI-BLAST 8.0 C/ebp beta
    2 View Details [147..368] MSA 5.228983 View MSA. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.97

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle