YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: TBB6_ARATH

General Information:
Name(s) found: TBB6_ARATH [Swiss-Prot]
Description(s) found:
SHOW ONLY BEST
  • gi|9759392|dbj|BAB10043.1| tubulin beta-6 chain [Arabidopsis thaliana] [NCBI NR]
  • pir||JQ1590 tubulin beta-6 chain - Arabidopsis thaliana [NCBI NR]
  • gi|267079|sp|P29514.1|TBB6_ARATH RecName: Full=Tubulin beta-6 chain; AltName: Full=Beta-6-tubulin [NCBI NR]
  • gi|166904|gb|AAA32884.1| beta-6 tubulin [NCBI NR]
  • gi|15239914|ref|NP_196786.1| TUB6 (BETA-6 TUBULIN); structural constituent of cytoskeleton [Arabidopsis thaliana] [NCBI NR]
  • gi|14532900|gb|AAK64132.1| putative tubulin beta-6 chain [Arabidopsis thaliana] [NCBI NR]
  • gi|13430696|gb|AAK25970.1|AF360260_1 putative tubulin beta-6 chain [Arabidopsis thaliana] [NCBI NR]
  • Tubulin beta-6 chain OS=Arabidopsis thaliana GN=TUBB6 PE=2 SV=1 [Swiss-Prot]
  • (P29514) Tubulin beta-6 chain [athaliana3702.FASTAC.txt]
  • putative tubulin beta-6 chain [Arabidopsis thaliana]gi|13430696|gb|AAK25970.1| putative tubulin beta-6 chain [Arabidopsis thaliana]gi|9759392|dbj|BAB10043.1| tubulin beta-6 chain [Arabidopsis thaliana]gi|15239914|ref|NP_196786.1| tubulin beta-6 chain ( [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 Tubulin beta-6 chain [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: TUB6 | TUB6 (BETA-6 TUBULIN) | chr5:3961318-3962972 REVERSE [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • putative tubulin beta-6 chain [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • tubulin beta-6 chain [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • TUB6 (BETA-6 TUBULIN) [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • beta-6 tubulin [nr-271106-contam.fasta]
  • Tubulin beta-6 chain (Beta-6 tubulin) [nr-271106-contam.fasta]
  • | Symbols: TUB6 | beta-6 tubulin | chr5:3961317-3962971 REVERSE LENGTH=449 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
    • Organism: Arabidopsis thaliana
    Length: 449 amino acids

    Gene Ontology:
    Cellular Component: microtubule cytoskeleton [ISS]
    plasma membrane [IDA]
    Biological Process: response to cold [IEP]
    response to salt stress [IEP]
    microtubule-based process [ISS]
    Molecular Function: structural constituent of cytoskeleton [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MREILHIQGG QCGNQIGSKF WEVVCDEHGI DPTGRYVGNS DLQLERVNVY YNEASCGRYV  60
   61 PRAILMDLEP GTMDSVRTGP YGQIFRPDNF VFGQSGAGNN WAKGHYTEGA ELIDAVLDVV 120
  121 RKEAENCDCL QGFQVCHSLG GGTGSGMGTL LISKIREEYP DRMMLTFSVF PSPKVSDTVV 180
  181 EPYNATLSVH QLVENADECM VLDNEALYDI CFRTLKLTTP SFGDLNHLIS ATMSGVTCCL 240
  241 RFPGQLNSDL RKLAVNLIPF PRLHFFMVGF APLTSRGSQQ YRALTVPELT QQMWDSKNMM 300
  301 CAADPRHGRY LTASAMFRGK MSTKEVDEQM INVQNKNSSY FVEWIPNNVK SSVCDIAPRG 360
  361 LSMASTFIGN STSIQEMFRR VSEQFTAMFR RKAFLHWYTG EGMDEMEFTE AESNMNDLVS 420
  421 EYQQYQDATA DDEGEYEEDE DEEEILDHE

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..449] PSI-BLAST 169.0 Tubulin:stathmin-like domain complex


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.92

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle