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Protein Overview: TBB5_ARATH

General Information:
Name(s) found: TBB5_ARATH [Swiss-Prot]
Description(s) found:
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  • gi|8778997|gb|AAF79912.1|AC022472_21 Contains a strong similarity to beta tubulin 1 from Arabidopsis thaliana gb|AF049870 and is a member of tubulin/FtsZ family PF|00091. ESTs gb|BE039541, gb|H75991, gb|T88373, gb|AI993432, gb|R65055, gb|BE039320, gb|Z25 [NCBI NR]
  • pir||JQ1589 tubulin beta-5 chain - Arabidopsis thaliana [NCBI NR]
  • gi|267077|sp|P29513.1|TBB5_ARATH RecName: Full=Tubulin beta-5 chain; AltName: Full=Beta-5-tubulin [NCBI NR]
  • gi|20334778|gb|AAM16250.1| At1g20010/T20H2_19 [Arabidopsis thaliana] [NCBI NR]
  • gi|18394812|ref|NP_564101.1| TUB5; structural constituent of cytoskeleton [Arabidopsis thaliana] [NCBI NR]
  • gi|166902|gb|AAA32883.1| beta-5 tubulin [NCBI NR]
  • gi|13605519|gb|AAK32753.1|AF361585_1 At1g20010/T20H2_19 [Arabidopsis thaliana] [NCBI NR]
  • Tubulin beta-5 chain OS=Arabidopsis thaliana GN=TUBB5 PE=2 SV=1 [Swiss-Prot]
  • (P29513) Tubulin beta-5 chain [athaliana3702.FASTAC.txt]
  • At1g20010/T20H2_19 [Arabidopsis thaliana]gi|8778997|gb|AAF79912.1| Contains a strong similarity to beta tubulin 1 from Arabidopsis thaliana gb|AF049870 and is a member of tubulin/FtsZ family PF|00091. ESTs gb|BE039541, gb|H75991, gb|T88373, gb|AI993432, [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 Tubulin beta-5 chain [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: TUB5 | TUB5 (tubulin beta-5 chain) | chr1:6938024-6940472 REVERSE [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • Contains a strong similarity to beta tubulin 1 from Arabidopsis thaliana gb|AF049870 and is a member of tubulin/FtsZ family PF|00091. ESTs gb|BE039541, gb|H75991, gb|T88373, gb|AI993432, gb|R65055, gb|BE039320, gb|Z25960, gb|T21260, gb|AV531631, gb|AV521 [nr-271106-contam.fasta]
  • At1g20010/T20H2_19 [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • Tubulin beta-5 chain (Beta-5 tubulin) [nr-271106-contam.fasta]
  • TUB5 [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • beta-5 tubulin [nr-271106-contam.fasta]
  • | Symbols: TUB5 | tubulin beta-5 chain | chr1:6938033-6940481 REVERSE LENGTH=449 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
    • Organism: Arabidopsis thaliana
    Length: 449 amino acids

    Gene Ontology:
    Cellular Component: chloroplast [IDA]
    tubulin complex [ISS]
    cell wall [IDA]
    membrane [IDA]
    plasma membrane [IDA]
    Biological Process: microtubule-based process [ISS]
    Molecular Function: structural constituent of cytoskeleton [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MREILHIQGG QCGNQIGSKF WEVICDEHGI DSTGRYSGDT ADLQLERINV YYNEASGGRY  60
   61 VPRAVLMDLE PGTMDSIRSG PFGQIFRPDN FVFGQSGAGN NWAKGHYTEG AELIDAVLDV 120
  121 VRKEAENCDC LQGFQVCHSL GGGTGSGMGT LLISKIREEY PDRMMLTFSV FPSPKVSDTV 180
  181 VEPYNATLSV HQLVENADEC MVLDNEALYD ICFRTLKLST PSFGDLNHLI SATMSGVTCS 240
  241 LRFPGQLNSD LRKLAVNLIP FPRLHFFMVG FAPLTSRGSQ QYISLTVPEL TQQMWDSKNM 300
  301 MCAADPRHGR YLTASAIFRG QMSTKEVDEQ ILNIQNKNSS YFVEWIPNNV KSSVCDIPPK 360
  361 GLKMAATFVG NSTSIQEMFR RVSEQFTAMF RRKAFLHWYT GEGMDEMEFT EAESNMNDLV 420
  421 AEYQQYQDAT ADEEGEYDVE EEEEGDYET

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..449] PSI-BLAST 173.0 Tubulin:stathmin-like domain complex


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.91

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle