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Protein Overview: SYVM1_ARATH

General Information:
Name(s) found: SYVM1_ARATH [Swiss-Prot]
Description(s) found:
Found 11 descriptions.
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  • Valine--tRNA ligase, mitochondrial 1 OS=Arabidopsis thaliana GN=TWN2 PE=2 SV=2 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 1108 amino acids

    Gene Ontology:
    Cellular Component: chloroplast [IDA]
    mitochondrion [IDA]
    Biological Process: tRNA aminoacylation for protein translation [ISS]
    embryonic development ending in seed dormancy [IMP]
    Molecular Function: nucleotide binding [IEA]
    valine-tRNA ligase activity [IEA]
    ATP binding [IEA][ISS]
    aminoacyl-tRNA ligase activity [IEA][ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSLLFLRRAK PLFVSCCSAT HSRSSFLSPT LTNQLVRSFH GSRTMSESEK KILTEEELER  60
   61 KKKKEEKAKE KELKKQKALE KERLAELKAK QAKDGTNVPK KSAKKSSKRD ASEENPEDFV 120
  121 DPETPLGERK RLSSQMAKQY SPATVEKSWY AWWEKSDLFK ADAKSSKPPF VIVLPPPNVT 180
  181 GALHIGHALT SAIEDTIIRW KRMSGYNALW VPGVDHAGIA TQVVVEKKIM RDRGMTRHDV 240
  241 GREEFVKEVW KWKNQYGGTI LTQLRRLGAS LDWSRECFTM DEQRSKAVTE AFVRLYKEGL 300
  301 IYRDIRLVNW DCILRTAISD VEVEYIDIKE KTLLKVPGYE KPVEFGLLTS FAYPLEGGLG 360
  361 EVIVATTRVE TMLGDTAIAI HPDDARYKHL HGKFAVHPFN GRKLPIICDG ILVDPNFGTG 420
  421 CVKITPAHDP NDCEVGKRHK LEFINIFTDD GKINTNGGSD FAGMPRFAAR EAVVEALQKQ 480
  481 GLYRGAKNNE MRLGLCSRTN DVIEPMIKPQ WYVNCSMIGK EALDVAITDE NKKLEFVPKQ 540
  541 YTAEWRRWLE NIRDWCISRQ LWWGHRIPAW YATLEEDQLK EVGAYSDHWV VARTEDDARE 600
  601 EAAQKFLGKK FELTRDPDVL DTWFSSGLFP LSVLGWPDVT DDFKAFYPTS VLETGHDILF 660
  661 FWVARMVMMG MKLGGEVPFS KVYFHPMIRD AHGRKMSKSL GNVIDPLEVI NGVTLEGLHK 720
  721 RLEEGNLDPK EVIVAKEGQV KDFPNGIPEC GTDALRFALV SYTAQSDKIN LDILRVVGYR 780
  781 QWCNKLWNAV RFAMMKLGDG YTPPQTLSPE TMPFSCQWIL SVLNKAISKT VVSLDAFEFS 840
  841 DAANTIYAWW QYQFCDVYIE AIKPYFAGDN PTFASERAHA QHALWISLET GLRLLHPFMP 900
  901 FVTEELWQRL PAPKDTERKA SIMICDYPSA IENWSNEKVE SEMDTVLATV KCMRALRAGL 960
  961 LEKQKNERLP AFALCENNVT SEIVKSHELE IRTLANLSSL EVVSKGQHAA PPGSSVETVN1020
 1021 ENLKVYLEVD GAINTEAEQE KIRNKIGELQ KQKEKLQKMM SVSTYEEKVP ANIKEDNANK1080
 1081 LAKILQEFDF FEKESARLAA ETSNSGNQ

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..134] deduced N/A No confident structure predictions are available.
    2 View Details [135..1108] PSI-BLAST 1000.0 Valyl-tRNA synthetase (ValRS) C-terminal domain; Valyl-tRNA synthetase (ValRS)


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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