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Protein Overview: BBX25_ARATH

General Information:
Name(s) found: BBX25_ARATH [Swiss-Prot]
Description(s) found:
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  • gi|20198155|gb|AAD26481.2| putative CONSTANS-like B-box zinc finger protein [Arabidopsis thaliana] [NCBI NR]
  • gi|18402646|ref|NP_565722.1| STH; protein domain specific binding / transcription factor/ zinc ion binding [Arabidopsis thaliana] [NCBI NR]
  • gi|17433195|sp|Q9SID1.2|STH_ARATH RecName: Full=Salt tolerance-like protein [NCBI NR]
  • gi|17104765|gb|AAL34271.1| putative CONSTANS B-box zinc finger protein [Arabidopsis thaliana] [NCBI NR]
  • gi|13878097|gb|AAK44126.1|AF370311_1 putative CONSTANS B-box zinc finger protein [Arabidopsis thaliana] [NCBI NR]
  • gi|13272413|gb|AAK17145.1|AF325077_1 putative CONSTANS-like B-box zinc finger protein [Arabidopsis thaliana] [NCBI NR]
  • gi|12698722|gb|AAK01658.1|AF323666_1 B-box zinc finger protein STH [Arabidopsis thaliana] [NCBI NR]
  • Salt tolerance-like protein OS=Arabidopsis thaliana GN=STH PE=1 SV=2 [Swiss-Prot]
  • B-box zinc finger protein 25 OS=Arabidopsis thaliana GN=BBX25 PE=1 SV=2 [Swiss-Prot]
  • (Q9SID1) Salt tolerance-like protein [athaliana3702.FASTAC.txt]
  • putative CONSTANS B-box zinc finger protein [Arabidopsis thaliana]gi|13878097|gb|AAK44126.1| putative CONSTANS B-box zinc finger protein [Arabidopsis thaliana]gi|20198155|gb|AAD26481.2| putative CONSTANS-like B-box zinc finger protein [Arabidopsis thali [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 Salt tolerance-like protein [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: STH | STH (salt tolerance homologue); transcription factor/ zinc ion binding | chr2:13389227-13390379 FORWARD [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • putative CONSTANS-like B-box zinc finger protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • putative CONSTANS B-box zinc finger protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • STH; transcription factor/ zinc ion binding [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • B-box zinc finger protein STH [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • Salt tolerance-like protein [nr-271106-contam.fasta]
  • | Symbols: STH | salt tolerance homologue | chr2:13382150-13383302 FORWARD LENGTH=238 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
    • Organism: Arabidopsis thaliana
    Length: 238 amino acids

    Gene Ontology:
    Cellular Component: endomembrane system [IEA]
    intracellular [IEA]
    Biological Process: regulation of transcription [TAS]
    Molecular Function: zinc ion binding [ISS]
    protein domain specific binding [NAS]
    transcription factor activity [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKIQCDVCEK APATLICCAD EAALCAKCDV EVHAANKLAS KHQRLFLDSL STKFPPCDIC  60
   61 LEKAAFIFCV EDRALLCRDC DEATHAPNTR SANHQRFLAT GIRVALSSTS CNQEVEKNHF 120
  121 DPSNQQSLSK PPTQQPAAPS PLWATDEFFS YSDLDCSNKE KEQLDLGELD WLAEMGLFGD 180
  181 QPDQEALPVA EVPELSFSHL AHAHSYNRPM KSNVPNKKQR LEYRYDDEEE HFLVPDLG

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..109] PSI-BLAST 4.69897 No description for 2djaA was found.
    2 View Details [110..238] MSA 1.218994 View MSA. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.93

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle