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Protein Overview: SQD1_ARATH

General Information:
Name(s) found: SQD1_ARATH [Swiss-Prot]
Description(s) found:
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  • pir||T05311 sulfolipid biosynthesis protein SQD1, chloroplast [validated] - Arabidopsis thaliana [NCBI NR]
  • gi|7270250|emb|CAB80020.1| sulfolipid biosynthesis protein SQD1 [Arabidopsis thaliana] [NCBI NR]
  • gi|38258404|sp|O48917.1|SQD1_ARATH RecName: Full=UDP-sulfoquinovose synthase, chloroplastic; AltName: Full=Sulfite:UDP-glucose sulfotransferase; AltName: Full=Sulfolipid biosynthesis protein; Flags: Precursor [NCBI NR]
  • gi|3688184|emb|CAA21212.1| sulfolipid biosynthesis protein SQD1 [Arabidopsis thaliana] [NCBI NR]
  • gi|2736155|gb|AAB94073.1| sulfolipid biosynthesis protein [Arabidopsis thaliana] [NCBI NR]
  • gi|21360527|gb|AAM47379.1| AT4g33030/F26P21_150 [Arabidopsis thaliana] [NCBI NR]
  • gi|15234041|ref|NP_195029.1| SQD1; UDPsulfoquinovose synthase/ sulfotransferase [Arabidopsis thaliana] [NCBI NR]
  • gi|14190483|gb|AAK55722.1|AF380641_1 AT4g33030/F26P21_150 [Arabidopsis thaliana] [NCBI NR]
  • UDP-sulfoquinovose synthase, chloroplastic OS=Arabidopsis thaliana GN=SQD1 PE=1 SV=1 [Swiss-Prot]
  • (O48917) UDP-sulfoquinovose synthase, chloroplast precursor (EC 3.13.1.1) (Sulfite:UDP-glucose sulfotransferase) (Sulfolipid biosynthesis protein) [athaliana3702.FASTAC.txt]
  • AT4g33030/F26P21_150 [Arabidopsis thaliana]gi|7270250|emb|CAB80020.1| sulfolipid biosynthesis protein SQD1 [Arabidopsis thaliana]gi|3688184|emb|CAA21212.1| sulfolipid biosynthesis protein SQD1 [Arabidopsis thaliana]gi|14190483|gb|AAK55722.1| AT4g33030/ [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 UDP-sulfoquinovose synthase, chloroplast precursor [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: SQD1 | SQD1 (sulfoquinovosyldiacylglycerol 1); UDPsulfoquinovose synthase | chr4:15936054-15937569 FORWARD [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • AT4g33030/F26P21_150 [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • UDP-sulfoquinovose synthase, chloroplast precursor (Sulfite:UDP-glucose sulfotransferase) (Sulfolipid biosynthesis protein) [nr-271106-contam.fasta]
  • sulfolipid biosynthesis protein SQD1 [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • sulfolipid biosynthesis protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • SQD1; UDPsulfoquinovose synthase [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: SQD1 | sulfoquinovosyldiacylglycerol 1 | chr4:15936051-15937566 FORWARD LENGTH=477 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
    • Organism: Arabidopsis thaliana
    Length: 477 amino acids

    Gene Ontology:
    Cellular Component: chloroplast [IDA]
    Biological Process: glycolipid biosynthetic process [IDA]
    cellular response to phosphate starvation [IEP][IMP]
    sulfolipid biosynthetic process [IDA]
    Molecular Function: UDPsulfoquinovose synthase activity [IDA]
    zinc ion binding [IDA]
    sulfotransferase activity [IDA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAHLLSASCP SVISLSSSSS KNSVKPFVSG QTFFNAQLLS RSSLKGLLFQ EKKPRKSCVF  60
   61 RATAVPITQQ APPETSTNNS SSKPKRVMVI GGDGYCGWAT ALHLSKKNYE VCIVDNLVRR 120
  121 LFDHQLGLES LTPIASIHDR ISRWKALTGK SIELYVGDIC DFEFLAESFK SFEPDSVVHF 180
  181 GEQRSAPYSM IDRSRAVYTQ HNNVIGTLNV LFAIKEFGEE CHLVKLGTMG EYGTPNIDIE 240
  241 EGYITITHNG RTDTLPYPKQ ASSFYHLSKV HDSHNIAFTC KAWGIRATDL NQGVVYGVKT 300
  301 DETEMHEELR NRLDYDAVFG TALNRFCVQA AVGHPLTVYG KGGQTRGYLD IRDTVQCVEI 360
  361 AIANPAKAGE FRVFNQFTEQ FSVNELASLV TKAGSKLGLD VKKMTVPNPR VEAEEHYYNA 420
  421 KHTKLMELGL EPHYLSDSLL DSLLNFAVQF KDRVDTKQIM PSVSWKKIGV KTKSMTT

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..81] PSI-BLAST 15.39794 No description for 2z5lA was found.
    2 View Details [82..477] PSI-BLAST 67.69897 Sulfolipid biosynthesis protein SQD1

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2
    Term Confidence Notes
  • catalytic activity
    		•  1.26736023026862 bayes_pls_golite062009
  • oxidoreductase activity
    		•  0.68812524232244 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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