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Protein Overview: SNP30_ARATH

General Information:
Name(s) found: SNP30_ARATH [Swiss-Prot]
Description(s) found:
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  • gi|8778388|gb|AAF79396.1|AC068197_6 F16A14.10 [Arabidopsis thaliana] [NCBI NR]
  • gi|27805725|sp|Q9LMG8.1|SNP30_ARATH RecName: Full=Putative SNAP25 homologous protein SNAP30; Short=AtSNAP30; AltName: Full=Synaptosomal-associated protein SNAP25-like 3 [NCBI NR]
  • pir||A86272 protein F16A14.10 [imported] - Arabidopsis thaliana [NCBI NR]
  • gi|15222976|ref|NP_172842.1| SNAP30 (SOLUBLE N-ETHYLMALEIMIDE-SENSITIVE FACTOR ADAPTOR PROTEIN 30); SNAP receptor [Arabidopsis thaliana] [NCBI NR]
  • Putative SNAP25 homologous protein SNAP30 OS=Arabidopsis thaliana GN=SNAP30 PE=3 SV=1 [Swiss-Prot]
  • (Q9LMG8) Putative SNAP25 homologous protein SNAP30 (AtSNAP30) (Synaptosomal-associated protein SNAP25-like 3) [Swiss-Prot]
  • F16A14.10 [Arabidopsis thaliana]gi|27805725|sp|Q9LMG8|SN30_ARATH Putative SNAP25 homologous protein SNAP30 (AtSNAP30) (Synaptosomal-associated protein SNAP25-like 3)gi|25372769|pir||A86272 protein F16A14.10 [imported] - Arabidopsis thalianagi|15222976| [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 Putative SNAP25 homologous protein SNAP30 [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: ATSNAP30, SNAP30 | SNAP30 (synaptosomal-associated protein 30) | chr1:4751578-4752841 FORWARD [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • F16A14.10 [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • SNAP30 [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • Putative SNAP25 homologous protein SNAP30 (AtSNAP30) (Synaptosomal-associated protein SNAP25-like 3) [nr-271106-contam.fasta]
  • | Symbols: SNAP30, ATSNAP30 | soluble N-ethylmaleimide-sensitive factor adaptor protein 30 | chr1:4751581-4752844 FORWARD LENGTH=263 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
    • Organism: Arabidopsis thaliana
    Length: 263 amino acids

    Gene Ontology:
    Cellular Component: cellular_component [ND]
    Biological Process: cellular membrane fusion [TAS]
    vesicle-mediated transport [TAS]
    Molecular Function: SNAP receptor activity [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFGFFKSPGN NKLPNESSNN KGGTITAGRR TSSEPILITP DFDDDDKYKN GFNDSGGLQS  60
   61 QTTEELEKYA VYKAEETTKG VNNCLKIAED IRSDGARTLE MLHQQGEQIN RTHEMAVDMD 120
  121 KDLSRGEKLL NNLGGMFSKP WKPKKTKNIT GPMITPDKPS KKSENHKEER EKLGLGAKGR 180
  181 SSSQPALDQP TNALQKVEQE KAKQDDGLSD LSDILGDLKS MAVDMGSEID KQNKALDHLG 240
  241 DDVDELNSRV QGANQRARHL LSK

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..263] PSI-BLAST 28.0 Syntaxin 1A N-terminal domain

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • binding
    		•  0.0431317456151565 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle