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Protein Overview: SLY1_ARATH

General Information:
Name(s) found: SLY1_ARATH [Swiss-Prot]
Description(s) found:
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  • gi|4406820|gb|AAD20128.1| putative SEC1 family transport protein [Arabidopsis thaliana] [NCBI NR]
  • gi|28201895|sp|Q9SL48.1|SLY1_ARATH RecName: Full=SEC1 family transport protein SLY1; Short=AtSLY1 [NCBI NR]
  • pir||G84558 probable SEC1 family transport protein [imported] - Arabidopsis thaliana [NCBI NR]
  • gi|16974335|gb|AAL31152.1| At2g17980/T27K22.15 [Arabidopsis thaliana] [NCBI NR]
  • gi|15227940|ref|NP_179389.1| ATSLY1; protein transporter [Arabidopsis thaliana] [NCBI NR]
  • gi|15215770|gb|AAK91430.1| At2g17980/T27K22.15 [Arabidopsis thaliana] [NCBI NR]
  • SEC1 family transport protein SLY1 OS=Arabidopsis thaliana GN=SLY1 PE=1 SV=1 [Swiss-Prot]
  • (Q9SL48) SEC1-family transport protein SLY1 (AtSLY1) [athaliana3702.FASTAC.txt]
  • putative SEC1 family transport protein [Arabidopsis thaliana]gi|16974335|gb|AAL31152.1| At2g17980/T27K22.15 [Arabidopsis thaliana]gi|15215770|gb|AAK91430.1| At2g17980/T27K22.15 [Arabidopsis thaliana]gi|28201895|sp|Q9SL48|SLY1_ARATH SEC1-family transpor [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 SEC1-family transport protein SLY1 [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: ATSLY1 | ATSLY1; protein transporter | chr2:7831434-7833486 FORWARD [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • protein transporter [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • SEC1-family transport protein SLY1 (AtSLY1) [nr-271106-contam.fasta]
  • At2g17980/T27K22.15 [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • putative SEC1 family transport protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: ATSLY1 | Sec1/munc18-like (SM) proteins superfamily | chr2:7824352-7826404 FORWARD LENGTH=627 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
    • Organism: Arabidopsis thaliana
    Length: 627 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: vesicle-mediated transport [IEA]
    vesicle docking during exocytosis [IEA]
    protein secretion [ISS]
    Molecular Function: protein transporter activity [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MALNLRQKQT ECVIRMLNLN QPLNPSGTAN EEVYKILIYD RFCQNILSPL THVKDLRKHG  60
   61 VTLFFLIDKD RQPVHDVPAV YFVQPTESNL QRIIADASRS LYDTFHLNFS SSIPRKFLEE 120
  121 LASGTLKSGS VEKVSKVHDQ YLEFVTLEDN LFSLAQQSTY VQMNDPSAGE KEINEIIERV 180
  181 ASGLFCVLVT LGVVPVIRCP SGGPAEMVAS LLDQKLRDHL LSKNNLFTEG GGFMSSFQRP 240
  241 LLCIFDRNFE LSVGIQHDFR YRPLVHDVLG LKLNQLKVQG EKGPPKSFEL DSSDPFWSAN 300
  301 STLEFPDVAV EIETQLNKYK RDVEEVNKKT GGGSGAEFDG TDLIGNIHTE HLMNTVKSLP 360
  361 ELTERKKVID KHTNIATALL GQIKERSIDA FTKKESDMMM RGGIDRTELM AALKGKGTKM 420
  421 DKLRFAIMYL ISTETINQSE VEAVEAALNE AEADTSAFQY VKKIKSLNAS FAATSANSAS 480
  481 RSNIVDWAEK LYGQSISAVT AGVKNLLSSD QQLAVTRTVE ALTEGKPNPE IDSYRFLDPR 540
  541 APKSSSSGGS HVKGPFREAI VFMIGGGNYV EYGSLQELTQ RQLTVKNVIY GATEILNGGE 600
  601 LVEQLGLLGK KMGLGGPVAS TSLSGGH

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..627] PSI-BLAST 135.0 Sly1P protein

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • SNARE binding
    		•  4.56428593085019 bayes_pls_golite062009
  • syntaxin binding
    		•  3.46044132736061 bayes_pls_golite062009
  • binding
    		•  2.5852206934785 bayes_pls_golite062009
  • protein binding
    		•  1.62257469066708 bayes_pls_golite062009
  • syntaxin-1 binding
    		•  0.269372794919901 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.94

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle