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Protein Overview: SEBP1_ARATH

General Information:
Name(s) found: SEBP1_ARATH [Swiss-Prot]
Description(s) found:
Found 18 descriptions.
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  • Selenium-binding protein 1 OS=Arabidopsis thaliana GN=SBP1 PE=1 SV=1 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 490 amino acids

    Gene Ontology:
    Cellular Component: cellular_component [ND]
    Biological Process: response to cadmium ion [IDA][IEP]
    response to hydrogen peroxide [IDA]
    cellular response to selenium ion [IDA]
    sulfate assimilation [IEP]
    Molecular Function: selenium binding [IEA][ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MATETEVVAP VTVSNGGSKG CCKYGGPGYA TPLAAMSGPS EKLIYVTAVY TGTGIDKPDY  60
   61 LATVDVDPSS PSYSSVIHRL PMPFVGDELH HSGWNSCSSC HGDASVDRRY LVLPSLISGR 120
  121 IYAIDTKENP RAPSLYKYVD PKEIADKTGL AFPHTAHCLA TGEILVSCLG DEEGNAKGNG 180
  181 FLLLDSDFNI KNRWEKPGHS PLYGYDFWYQ PRHKTMISTS WGAPKAFSKG FNLQHVADGL 240
  241 YGSHLHVYSW PGGEIKQLID LGPTGLLPLE IRFLHDPSKD TGFVGSALSS NMIRFFKNSD 300
  301 ETWSHEVVIS VKPLKVENWI LPEMPGLITD FLISLDDRFI YFVNWLHGDI RQYNIEDPKN 360
  361 PVLTGQIWVG GLLQKGSPVK AVGEDGNTFQ FEVPQIKGKS LRGGPQMIQL SLDGKRLYAT 420
  421 NSLFSAWDRQ FYPEIMEKGS HIIQIDVDTE KGGLTINPDF FVDFGDEPDG PSLAHEMRYP 480
  481 GGDCTSDIWI

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..490] FFAS03 3.78 N-terminal (heme c) domain of cytochrome cd1-nitrite reductase; C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • binding
    		•  1.03425552384046 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle