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Protein Overview: RL211_ARATH

General Information:
Name(s) found: RL211_ARATH [Swiss-Prot]
Description(s) found:
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  • gi|3482935|gb|AAC33220.1| Putative ribosomal protein L21 [Arabidopsis thaliana] [NCBI NR]
  • gi|2851508|sp|Q43291.2|RL211_ARATH RecName: Full=60S ribosomal protein L21-1 [NCBI NR]
  • pir||G86230 hypothetical protein [imported] - Arabidopsis thaliana [NCBI NR]
  • gi|23397265|gb|AAN31914.1| putative 60S ribosomal protein L21 [Arabidopsis thaliana] [NCBI NR]
  • gi|2160162|gb|AAB60725.1| Similar to ribosomal protein L21 (gb|L38826). ESTs gb|AA395597,gb|ATTS5197 come from this gene. [Arabidopsis thaliana] [NCBI NR]
  • gi|20148655|gb|AAM10218.1| similar to ribosomal protein L21 [Arabidopsis thaliana] [NCBI NR]
  • gi|18391054|ref|NP_563849.1| 60S ribosomal protein L21 (RPL21C) [Arabidopsis thaliana] [NCBI NR]
  • gi|18391042|ref|NP_563847.1| 60S ribosomal protein L21 (RPL21A) [Arabidopsis thaliana] [NCBI NR]
  • gi|16649107|gb|AAL24405.1| Similar to ribosomal protein L21 [Arabidopsis thaliana] [NCBI NR]
  • gi|16323462|gb|AAL15225.1| putative 60S ribosomal protein L21 [Arabidopsis thaliana] [NCBI NR]
  • gi|13877929|gb|AAK44042.1|AF370227_1 putative 60S ribosomal protein L21 [Arabidopsis thaliana] [NCBI NR]
  • (Q43291) 60S ribosomal protein L21 [Swiss-Prot]
  • 60S ribosomal protein L21-1 OS=Arabidopsis thaliana GN=RPL21A PE=2 SV=2 [Swiss-Prot]
  • Putative ribosomal protein L21 [Arabidopsis thaliana]gi|23397265|gb|AAN31914.1| putative 60S ribosomal protein L21 [Arabidopsis thaliana]gi|16323462|gb|AAL15225.1| putative 60S ribosomal protein L21 [Arabidopsis thaliana]gi|13877929|gb|AAK44042.1| puta [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 60S ribosomal protein L21 [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: | 60S ribosomal protein L21 (RPL21A) | chr1:3106551-3107608 FORWARD [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • | Symbols: | 60S ribosomal protein L21 (RPL21C) | chr1:3136409-3137432 REVERSE [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • Similar to ribosomal protein L21 [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • Similar to ribosomal protein L21 (gb|L38826). ESTs gb|AA395597,gb|ATTS5197 come from this gene. [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • similar to ribosomal protein L21 [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • Putative ribosomal protein L21 [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • structural constituent of ribosome [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • putative 60S ribosomal protein L21 [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • 60S ribosomal protein L21-1 [nr-271106-contam.fasta]
  • | Symbols: | Translation protein SH3-like family protein | chr1:3106549-3107606 FORWARD LENGTH=164 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
  • | Symbols: | Translation protein SH3-like family protein | chr1:3136407-3137430 REVERSE LENGTH=164 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
    • Organism: Arabidopsis thaliana
    Length: 164 amino acids

    Gene Ontology:
    Cellular Component: chloroplast [IDA]
    cytosolic ribosome [IDA]
    cytosolic large ribosomal subunit [IDA]
    nucleolus [IDA]
    ribosome [ISS]
    Biological Process: translation [IEA][ISS]
    Molecular Function: structural constituent of ribosome [IEA][ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPAGHGVRAR TRDLFARPFR KKGYIPLSTY LRTFKVGDYV DVKVNGAIHK GMPHKFYHGR  60
   61 TGRIWNVTKR AVGVEVNKQI GNRIIRKRIH VRVEHVQQSR CAEEFKLRKK KNDELKAAAK 120
  121 ANGETISTKR QPKGPKPGFM VEGMTLETVT PIPYDVVNDL KGGY

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..164] PSI-BLAST 37.39794 Structure of the ribosomal 80S-eEF2-sordarin complex from yeast obtained by docking atomic models for RNA and protein components into a 11.7 A cryo-EM map. This file, 1S1I, Contains 60S subunit. The 40S Ribosomal Subunit Is In File 1S1H.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle