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Protein Overview: PDX13_ARATH

General Information:
Name(s) found: PDX13_ARATH [Swiss-Prot]
Description(s) found:
Found 22 descriptions.
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  • Pyridoxal 5'-phosphate synthase subunit PDX1.3 OS=Arabidopsis thaliana GN=PDX13 PE=1 SV=2 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 309 amino acids

    Gene Ontology:
    Cellular Component: cytosol [IDA]
    endomembrane system [IDA]
    plasma membrane [IDA]
    Biological Process: response to oxidative stress [IMP]
    chlorophyll metabolic process [IMP]
    hyperosmotic salinity response [IMP]
    pyridoxine biosynthetic process [IGI]
    response to salt stress [IMP]
    vitamin B6 biosynthetic process [IGI]
    response to lipid hydroperoxide [IMP]
    cellular amino acid metabolic process [IMP]
    response to non-ionic osmotic stress [IMP]
    response to UV-B [IGI]
    response to stress [IMP]
    Molecular Function: protein homodimerization activity [IPI]
    protein heterodimerization activity [IPI]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEGTGVVAVY GNGAITEAKK SPFSVKVGLA QMLRGGVIMD VVNAEQARIA EEAGACAVMA  60
   61 LERVPADIRA QGGVARMSDP QMIKEIKQAV TIPVMAKARI GHFVEAQILE AIGIDYIDES 120
  121 EVLTLADEDH HINKHNFRIP FVCGCRNLGE ALRRIREGAA MIRTKGEAGT GNIIEAVRHV 180
  181 RSVNGDIRVL RNMDDDEVFT FAKKLAAPYD LVMQTKQLGR LPVVQFAAGG VATPADAALM 240
  241 MQLGCDGVFV GSGIFKSGDP ARRARAIVQA VTHYSDPEML VEVSCGLGEA MVGINLNDEK 300
  301 VERFANRSE

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..309] PSI-BLAST 80.0 No description for 2nv2A was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.95

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle