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Protein Overview: PLY18_ARATH

General Information:
Name(s) found: PLY18_ARATH [Swiss-Prot]
Description(s) found:
Found 12 descriptions.
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  • Probable pectate lyase 18 OS=Arabidopsis thaliana GN=At4g24780 PE=2 SV=2 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 408 amino acids

    Gene Ontology:
    Cellular Component: membrane [IDA]
    Biological Process: biological_process [ND]
    Molecular Function: pectate lyase activity [ISS]
    lyase activity [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKMQTKKLFI TIVSFLLYAP LFLSSPVPDP ESVVEEVHKS INASVAGRRK LGYLSCTTGN  60
   61 PIDDCWRCDP HWEQHRQRLA DCAIGFGKNA IGGRDGRIYV VTDSGNDNPV SPKPGTLRHA 120
  121 VVQDEPLWII FQRDMTIQLK EELIMNSFKT IDGRGASVHI SGGPCITIQY VTNIIIHGIH 180
  181 IHDCKQGGNA MVRSSPRHFG WRTISDGDGV SIFGGSHVWV DHCSFSNCED GLIDAIMGST 240
  241 AITLSNNHMT HHDKVMLLGH SDTYSRDKNM QVTIAFNHFG EGLVQRMPRC RHGYFHVVNN 300
  301 DYTHWEMYAI GGSANPTINS QGNRFLAPNI RFSKEVTKHE DAPESEWKRW NWRSSGDLLL 360
  361 NGAFFTPSGG AASSSYAKAS SLGAKPSSLV GPLTSTSGAL NCRKGSRC

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..408] PSI-BLAST 78.69897 1.7 Angstrom Crystal Structure of jun a 1, the major allergen from cedar pollen

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • catalytic activity
    		•  0.142826098671881 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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