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Protein Overview: PLY16_ARATH

General Information:
Name(s) found: PLY16_ARATH [Swiss-Prot]
Description(s) found:
Found 14 descriptions.
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  • Probable pectate lyase 16 OS=Arabidopsis thaliana GN=At4g22080 PE=2 SV=1 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 394 amino acids

    Gene Ontology:
    Cellular Component: endomembrane system [IEA]
    Biological Process: biological_process [ND]
    Molecular Function: pectate lyase activity [ISS]
    lyase activity [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTLFTVSCLL VVLFLCHSLV HAENNGYYGY TPTVANYLPE KPQNIMNPVD SCWRLKSDWA  60
   61 ANRKDLADCV VGFGSSTLGG KKGNLYVVTN PYDNAQNPQP GSLRYGVIQA KPLWITFAKD 120
  121 MVITLENELM VNSYKTIDGR GAKVEIAYGP CITIQDVTNV IVHGISIHDC KPGKYGMVRS 180
  181 SPTHVGHRKG SDGDAIAIFG SSNIWIDHCY LASCTDGLID VIHASTGITI SNNYFTQHDK 240
  241 VMLLGHNDDF VQDVKMKVTV AFNHFGPGLV ERMPRVRRGY AHVANNRYDK WIMYAIGGSA 300
  301 DPTIFSEGNY FIASDKSNSK EVTKREVKGG WNNWRWRTSK DVFKNGAYFV PSGYGSISLP 360
  361 YSSAQRFTVA PGNLVPSLTA DAGPLNCNRN GPCY

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..394] PSI-BLAST 86.69897 1.7 Angstrom Crystal Structure of jun a 1, the major allergen from cedar pollen

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • catalytic activity
    		•  0.142826098671881 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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