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Protein Overview: PLDG1_ARATH

General Information:
Name(s) found: PLDG1_ARATH [Swiss-Prot]
Description(s) found:
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  • pir||T09344 probable phospholipase D (EC 3.1.4.4) gamma T26M18.60 - Arabidopsis thaliana [NCBI NR]
  • gi|7267885|emb|CAB78228.1| putative phospholipase D-gamma [Arabidopsis thaliana] [NCBI NR]
  • gi|5002520|emb|CAB44323.1| putative phospholipase D-gamma [Arabidopsis thaliana] [NCBI NR]
  • gi|25084000|gb|AAN72151.1| putative phospholipase D-gamma [Arabidopsis thaliana] [NCBI NR]
  • gi|20466207|gb|AAM20421.1| putative phospholipase D-gamma [Arabidopsis thaliana] [NCBI NR]
  • gi|20139278|sp|Q9T053.1|PLDG1_ARATH RecName: Full=Phospholipase D gamma 1; Short=AtPLDgamma1; Short=PLD gamma 1; AltName: Full=Choline phosphatase; AltName: Full=Lipophosphodiesterase II; AltName: Full=Lecithinase D [NCBI NR]
  • gi|15234335|ref|NP_192922.1| PLDGAMMA1; phospholipase D [Arabidopsis thaliana] [NCBI NR]
  • Phospholipase D gamma 1 OS=Arabidopsis thaliana GN=PLDGAMMA1 PE=1 SV=1 [Swiss-Prot]
  • (Q9T053) Phospholipase D gamma 1 (EC 3.1.4.4) (AtPLDgamma1) (PLD gamma 1) (Choline phosphatase) (Lipophosphodiesterase II) (Lecithinase D) [Swiss-Prot]
  • putative phospholipase D-gamma [Arabidopsis thaliana]gi|20466207|gb|AAM20421.1| putative phospholipase D-gamma [Arabidopsis thaliana]gi|5002520|emb|CAB44323.1| putative phospholipase D-gamma [Arabidopsis thaliana]gi|25084000|gb|AAN72151.1| putative pho [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 Phospholipase D gamma 1 [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: MEE54 | PLDGAMMA1 (maternal effect embryo arrest 54); phospholipase D | chr4:7129346-7132931 REVERSE [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • putative phospholipase D-gamma [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • Phospholipase D gamma 1 (AtPLDgamma1) (PLD gamma 1) (Choline phosphatase) (Lipophosphodiesterase II) (Lecithinase D) [nr-271106-contam.fasta]
  • PLDGAMMA1; phospholipase D [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: PLDGAMMA1, MEE54 | phospholipase D gamma 1 | chr4:7129352-7132937 REVERSE LENGTH=858 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
    • Organism: Arabidopsis thaliana
    Length: 858 amino acids

    Gene Ontology:
    Cellular Component: plasma membrane [IDA]
    Biological Process: defense response to bacterium, incompatible interaction [IGI]
    embryonic development ending in seed dormancy [IMP]
    Molecular Function: protein binding [IPI]
    phospholipase D activity [IDA][ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAYHPAYTET MSMGGGSSHG GGQQYVPFAT SSGSLRVELL HGNLDIWVKE AKHLPNMDGF  60
   61 HNRLGGMLSG LGRKKVEGEK SSKITSDPYV TVSISGAVIG RTFVISNSEN PVWMQHFDVP 120
  121 VAHSAAEVHF VVKDSDIIGS QIMGAVGIPT EQLCSGNRIE GLFPILNSSG KPCKQGAVLG 180
  181 LSIQYTPMER MRLYQMGVGS GNECVGVPGT YFPLRKGGRV TLYQDAHVDD GTLPSVHLDG 240
  241 GIQYRHGKCW EDMADAIRQA RRLIYITGWS VFHPVRLVRR TNDPTEGTLG ELLKVKSQEG 300
  301 VRVLVLVWDD PTSRSLLGFK TQGVMNTSDE ETRRFFKHSS VQVLLCPRSG GKGHSFIKKS 360
  361 EVGTIYTHHQ KTVIVDAEAA QNRRKIVAFV GGLDLCNGRF DTPKHPLFRT LKTLHKDDFH 420
  421 NPNFVTTADD GPREPWHDLH SKIDGPAAYD VLANFEERWM KASKPRGIGK LKSSSDDSLL 480
  481 RIDRIPDIVG LSEASSANDN DPESWHVQVF RSIDSSSVKG FPKDPKEATG RNLLCGKNIL 540
  541 IDMSIHAAYV KAIRSAQHFI YIENQYFLGS SFNWDSNKDL GANNLIPMEI ALKIANKIRA 600
  601 REKFAAYIVI PMWPEGAPTS NPIQRILYWQ HKTMQMMYQT IYKALVEVGL DSQFEPQDFL 660
  661 NFFCLGTREV PVGTVSVYNS PRKPPQPNAN ANAAQVQALK SRRFMIYVHS KGMVVDDEFV 720
  721 LIGSANINQR SLEGTRDTEI AMGGYQPHYS WAMKGSRPHG QIFGYRMSLW AEHLGFLEQG 780
  781 FEEPENMECV RRVRQLSELN WRQYAAEEVT EMSGHLLKYP VQVDRTGKVS SLPGCETFPD 840
  841 LGGKIIGSFL ALQENLTI

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..399] PSI-BLAST 11.30103 Domain from cytosolic phospholipase A2; Cytosolic phospholipase A2 catalytic domain
    2 View Details [400..463] deduced N/A No confident structure predictions are available.
    3 View Details [464..774] PSI-BLAST 4.0 Crystal Structure of Escherichia coli Polyphosphate Kinase
    4 View Details [775..858] deduced N/A No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.96

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle