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Protein Overview: PLDA4_ARATH

General Information:
Name(s) found: PLDA4_ARATH [Swiss-Prot]
Description(s) found:
Found 14 descriptions.
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  • Phospholipase D alpha 4 OS=Arabidopsis thaliana GN=PLDALPHA4 PE=2 SV=1 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 762 amino acids

    Gene Ontology:
    Cellular Component: plasma membrane [IDA]
    Biological Process: root development [IMP]
    cell division [IMP]
    cellular response to potassium ion starvation [IMP]
    positive regulation of nitrogen utilization [IMP]
    phospholipid catabolic process [IDA][TAS]
    post-embryonic development [IMP]
    response to osmotic stress [IMP]
    cellular response to phosphate starvation [IMP]
    cell growth [IMP]
    cellular response to nitrogen starvation [IMP]
    Molecular Function: phospholipase D activity [IDA][ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MELEEQKKYF HGTLEITIFD ATPFSPPFPF NCICTKPKAA YVTIKINKKK VAKTSSEYDR  60
   61 IWNQTFQILC AHPVTDTTIT ITLKTRCSVL GRFRISAEQI LTSNSAVING FFPLIADNGS 120
  121 TKRNLKLKCL MWFRPAYLEP GWCRALEEAS FQGIRNASFP QRSNCRVVLY QDAHHKATFD 180
  181 PRVDDVPFNA RNLWEDVYKA IESARHLVYI AGWALNPNLV LVRDNETEIP HAVGVTVGEL 240
  241 LKRKSEEGVA VRVMLWNDET SLPMIKNKGV MRTNVERALA YFRNTNVVCR LCPRLHKKLP 300
  301 TAFAHHQKTI TLDTRVTNSS TKEREIMSFL GGFDLCDGRY DTEEHSLFRT LGTEADFYQT 360
  361 SVAGAKLSRG GPREPWHDCH VSVVGGAAWD VLKNFEQRWT KQCNPSVLVN TSGIRNLVNL 420
  421 TGPTEENNRK WNVQVLRSID HISATEMPRG LPVEKSVHDG YVAAIRKAER FIYIENQYFM 480
  481 GSCDHWESKN DKICSGCTNL IPVEIALKIA AKIRARERFA VYIVIPMWPE GPPESETVEE 540
  541 ILHWTRETMS MMYQIIGEAI WEVGDKSHPR DYLNFFCLAN REEKRDGEFE AVSSPHQKTH 600
  601 YWNAQRNRRF MVYVHSKLMI VDDTYILIGS ANINQRSMDG CRDTEIAIGC YQTNTNNTNE 660
  661 IQAYRLSLWY EHTGGKITAD DLSSSEPESL ECVRGLRTIG EQMWEIYSGD KVVDMLGIHL 720
  721 VAYPISVTGD GAVEEVGDGC FPDTKTLVKG KRSKMFPPVL TT

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..122] PSI-BLAST 13.522879 Crystallographic Identification of Sr2+ Coordination Site in Synaptotagmin I C2B Domain
    2 View Details [123..762] FFAS03 6.62 Tungstate-inhibited phospholipase D from Streptomyces sp. strain PMF.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • binding
    		•  0.0816027554254649 bayes_pls_golite062009
    2
    Term Confidence Notes
  • catalytic activity
    		•  0.674770578390245 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.98

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle