YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: NRL3_ARATH

General Information:
Name(s) found: NRL3_ARATH [Swiss-Prot]
Description(s) found:
Found 20 descriptions.
SHOW ALL
  • Nitrilase 3 OS=Arabidopsis thaliana GN=NIT3 PE=1 SV=1 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 346 amino acids

    Gene Ontology:
    Cellular Component: cellular_component [ND]
    Biological Process: cellular response to sulfate starvation [IEP]
    glucosinolate catabolic process [TAS]
    response to cadmium ion [IEP]
    Molecular Function: indole-3-acetonitrile nitrile hydratase activity [IDA]
    indole-3-acetonitrile nitrilase activity [IDA]
    nitrilase activity [IDA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSSTEEMSSV KNTTQVIGVD PSSTVRVTIV QSSTVYNDTP ATLDKAEKFI VEAASKGAKL  60
   61 VLFPEAFIGG YPRGFRFGLA VGVHNEEGRD EFRNYHASAI KVPGPEVERL AELAGKNNVH 120
  121 LVMGAIEKDG YTLYCTALFF SPQGQFLGKH RKVMPTSLER CIWGQGDGST IPVYDTPIGK 180
  181 IGAAICWENR MPLYRTALYA KGIEIYCAPT ADYSLEWQAS MIHIAVEGGC FVLSAHQFCK 240
  241 RREFPEHPDY LFNDIVDTKE HDPTVSGGGS VIISPLGKVL AGPNYESEGL VTADLDLGDI 300
  301 ARAKLYFDVV GHYSKPDIFN LTVNEHPKKP VTFMTKVEKA EDESNK

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..346] PSI-BLAST 58.522879 Crystal Structure of Hypothetical Protein PH0642 from Pyrococcus horikoshii

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds
    		•  2.08563993959019 bayes_pls_golite062009
  • catalytic activity
    		•  1.64442398754697 bayes_pls_golite062009
  • binding
    		•  1.58491015879508 bayes_pls_golite062009
  • protein binding
    		•  0.276768866737717 bayes_pls_golite062009
  • hydrolase activity
    		•  0.056614713418243 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.97

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle