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Protein Overview: APK1_ARATH

General Information:
Name(s) found: APK1_ARATH [Swiss-Prot]
Description(s) found:
Found 22 descriptions.
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  • Adenylyl-sulfate kinase 1, chloroplastic OS=Arabidopsis thaliana GN=APK1 PE=1 SV=1 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 276 amino acids

    Gene Ontology:
    Cellular Component: chloroplast [IDA]
    plastid [TAS]
    Biological Process: male gamete generation [IGI]
    regulation of glucosinolate biosynthetic process [IGI]
    phosphorylation [IDA]
    sulfate assimilation [IGI][ISS]
    Molecular Function: ATP binding [ISS]
    adenylylsulfate kinase activity [IDA]
    transferase activity, transferring phosphorus-containing groups [ISS]
    kinase activity [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIAAGAKSLL GLSMASPKGI FDSNSMSNSR SVVVVRACVS MDGSQTLSHN KNGSIPEVKS  60
   61 INGHTGQKQG PLSTVGNSTN IKWHECSVEK VDRQRLLDQK GCVIWVTGLS GSGKSTLACA 120
  121 LNQMLYQKGK LCYILDGDNV RHGLNRDLSF KAEDRAENIR RVGEVAKLFA DAGIICIASL 180
  181 ISPYRTDRDA CRSLLPEGDF VEVFMDVPLS VCEARDPKGL YKLARAGKIK GFTGIDDPYE 240
  241 PPLNCEISLG REGGTSPIEM AEKVVGYLDN KGYLQA

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..84] PSI-BLAST 5.69897 Crystal Structure of a GTP-Regulated ATP Sulfurylase Heterodimer from Pseudomonas syringae
    2 View Details [85..276] PSI-BLAST 42.0 The crystal structure of human 3'-phosphoadenosine-5'-phosphosulfate synthetase 1

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • binding
    		•  1.70949154761417 bayes_pls_golite062009
  • nucleic acid binding
    		•  1.2254998559935 bayes_pls_golite062009
    2
    Term Confidence Notes
  • binding
    		•  2.0914769303586 bayes_pls_golite062009
  • catalytic activity
    		•  1.00104173493322 bayes_pls_golite062009
  • nucleic acid binding
    		•  0.727912309521959 bayes_pls_golite062009
  • DNA binding
    		•  0.263924823205515 bayes_pls_golite062009
  • nucleotide binding
    		•  0.0593371872166591 bayes_pls_golite062009
  • purine nucleotide binding
    		•  0.0285347443435678 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.64

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle