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Protein Overview: IMDH2_ARATH

General Information:
Name(s) found: IMDH2_ARATH [Swiss-Prot]
Description(s) found:
Found 15 descriptions.
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  • Inosine-5'-monophosphate dehydrogenase 2 OS=Arabidopsis thaliana GN=At1g16350 PE=1 SV=1 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 502 amino acids

    Gene Ontology:
    Cellular Component: cellular_component [ND]
    Biological Process: metabolic process [IEA]
    GMP biosynthetic process [ISS]
    Molecular Function: catalytic activity [IEA]
    IMP dehydrogenase activity [IEA][ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSGFEDGFSA EKLFSQGYSY TYDDVIFLPH FIDFSTDAVS LSTRLSKRVP LSIPCVASPM  60
   61 DTVSESHMAA AMAALGGIGI VHYNCDIDTQ ASVIRHAKSL QVPIASDAVF KCPEHQIGSV 120
  121 DDFGPSSFVF VSQTGTLTPK LLGYVSKSEW SSMKDDQKEV KIYDYMKSCE NKDYYVPWDI 180
  181 DLDKIEAVLE DKQKGFVVLE KEGETVNVVT KDDVERVKGY PKLGSGTVGA DKKWMVGAAI 240
  241 GTRESDKERL EHLVKAGANV VVLDSSQGNS IYQLEMIKYV KNTYPELDVV GGNVVTMYQA 300
  301 ENLIKAGVDG LRVGMGSGSI CTTQEVCAVG RGQATAVYKV STLAAQHGVP VIADGGISNS 360
  361 GHIVKALVLG ASTVMMGSFL AGSTEAPGAY EYRNGRRVKK YRGMGSLEAM TKGSDQRYLG 420
  421 DTAKLKIAQG VVGAVADKGS VLKFIPYTMH AVKQGFQDLG ASSLQSAHEL LRDNTLRLEA 480
  481 RTGAAQIEGG IHGLVSYEKK SF

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..502] PSI-BLAST 107.0 Inosine monophosphate dehydrogenase (IMPDH)

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • IMP dehydrogenase activity
    		•  2.02048863053452 bayes_pls_golite062009
  • binding
    		•  0.964202692685807 bayes_pls_golite062009
  • transporter activity
    		•  0.961062314616209 bayes_pls_golite062009
  • transmembrane transporter activity
    		•  0.807029018941177 bayes_pls_golite062009
  • substrate-specific transporter activity
    		•  0.640881170978843 bayes_pls_golite062009
  • substrate-specific transmembrane transporter activity
    		•  0.525366315833255 bayes_pls_golite062009
  • ion transmembrane transporter activity
    		•  0.440262824681055 bayes_pls_golite062009
  • protein binding
    		•  0.22179604283012 bayes_pls_golite062009
  • catalytic activity
    		•  0.181756622780318 bayes_pls_golite062009
  • di-, tri-valent inorganic cation transmembrane transporter activity
    		•  0.0973526732376297 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.88

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle