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Protein Overview: EIF3C_ARATH

General Information:
Name(s) found: EIF3C_ARATH [Swiss-Prot]
Description(s) found:
Found 18 descriptions.
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  • Eukaryotic translation initiation factor 3 subunit C OS=Arabidopsis thaliana GN=TIF3C1 PE=1 SV=2 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 900 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IDA]
    cytosol [IDA]
    Biological Process: translational initiation [IEA]
    Molecular Function: translation initiation factor activity [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTSRFFTQVG SESEDESDYE VEVNEVQNDD VNNRYLQSGS EDDDDTDTKR VVKPAKDKRF  60
   61 EEMTYTVDQM KNAMKINDWV SLQENFDKVN KQLEKVMRIT EAVKPPTLYI KTLVMLEDFL 120
  121 NEALANKEAK KKMSTSNSKA LNSMKQKLKK NNKLYEDDIN KYREAPEVEE EKQPEDDDDD 180
  181 DDDDDEVEDD DDSSIDGPTV DPGSDVDEPT DNLTWEKMLS KKDKLLEKLM NKDPKEITWD 240
  241 WVNKKFKEIV AARGKKGTAR FELVDQLTHL TKIAKTPAQK LEILFSVISA QFDVNPGLSG 300
  301 HMPINVWKKC VLNMLTILDI LVKYSNIVVD DTVEPDENET SKPTDYDGKI RVWGNLVAFL 360
  361 ERVDTEFFKS LQCIDPHTRE YVERLRDEPM FLALAQNIQD YFERMGDFKA AAKVALRRVE 420
  421 AIYYKPQEVY DAMRKLAELV EEEEETEEAK EESGPPTSFI VVPEVVPRKP TFPESSRAMM 480
  481 DILVSLIYRN GDERTKARAM LCDINHHALM DNFVTARDLL LMSHLQDNIQ HMDISTQILF 540
  541 NRTMAQLGLC AFRAGMITES HSCLSELYSG QRVRELLAQG VSQSRYHEKT PEQERMERRR 600
  601 QMPYHMHLNL ELLEAVHLIC AMLLEVPNMA ANSHDAKRRV ISKNFRRLLE ISERQAFTAP 660
  661 PENVRDHVMA ATRALTKGDF QKAFEVLNSL EVWRLLKNRD SILDMVKDRI KEEALRTYLF 720
  721 TYSSSYESLS LDQLAKMFDV SEPQVHSIVS KMMINEELHA SWDQPTRCIV FHEVQHSRLQ 780
  781 SLAFQLTEKL SILAESNERA MESRTGGGGL DLSSRRRDNN QDYAGAASGG GGYWQDKANY 840
  841 GQGRQGNRSG YGGGRSSGQN GQWSGQNRGG GYAGRVGSGN RGMQMDGSSR MVSLNRGVRT 900
  901

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..294] PSI-BLAST 9.30103 Heavy meromyosin subfragment
    2 View Details [295..490] deduced N/A No confident structure predictions are available.
    3 View Details [491..583] deduced N/A No confident structure predictions are available.
    4 View Details [584..800] Pfam 40.60206 No description for PF01399.19 was found. No confident structure predictions are available.
    5 View Details [801..900] PSI-BLAST 5.69897 No description for 1y0fB was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle