Protein Overview: IAA6_ARATH

General Information:
Name(s) found:	IAA6_ARATH [Swiss-Prot]
Description(s) found: SHOW ONLY BEST	pir\|\|E96569 probable IAA6 protein, 42631-41742 [imported] - Arabidopsis thaliana [NCBI NR] gi\|225898022\|dbj\|BAH30343.1\| hypothetical protein [Arabidopsis thaliana] [NCBI NR] gi\|21264406\|sp\|Q38824.2\|IAA6_ARATH RecName: Full=Auxin-responsive protein IAA6; AltName: Full=Indoleacetic acid-induced protein 6 [NCBI NR] gi\|15219101\|ref\|NP_175692.1\| IAA6 (INDOLE-3-ACETIC ACID 6); transcription factor [Arabidopsis thaliana] [NCBI NR] gi\|12484195\|gb\|AAG53996.1\|AF336915_1 IAA6 [Arabidopsis thaliana] [NCBI NR] gi\|12324632\|gb\|AAG52268.1\|AC019018_5 putative IAA6 protein; 42631-41742 [Arabidopsis thaliana] [NCBI NR] Auxin-responsive protein IAA6 OS=Arabidopsis thaliana GN=IAA6 PE=1 SV=2 [Swiss-Prot] (Q38824) Auxin-responsive protein IAA6 (Indoleacetic acid-induced protein 6) [athaliana3702.FASTAC.txt] IAA6 [Arabidopsis thaliana]gi\|21264406\|sp\|Q38824\|IAA6_ARATH Auxin-responsive protein IAA6 (Indoleacetic acid-induced protein 6)gi\|12324632\|gb\|AAG52268.1\| putative IAA6 protein; 42631-41742 [Arabidopsis thaliana]gi\|15219101\|ref\|NP_175692.1\| auxin-respon [nrdb_11152004_Chlamydomonas] Tax_Id=3702 Auxin-responsive protein IAA6 [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta] \| Symbols: SHY1, IAA6 \| IAA6 (indoleacetic acid-induced protein 6); transcription factor \| chr1:19676338-19677227 REVERSE [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta] putative IAA6 protein; 42631-41742 [Arabidopsis thaliana] [nr-271106-contam.fasta] Auxin-responsive protein IAA6 (Indoleacetic acid-induced protein 6) [nr-271106-contam.fasta] IAA6 [Arabidopsis thaliana] [nr-271106-contam.fasta] IAA6; transcription factor [Arabidopsis thaliana] [nr-271106-contam.fasta] \| Symbols: IAA6, SHY1 \| indole-3-acetic acid 6 \| chr1:19672670-19673559 REVERSE LENGTH=189 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
Organism:	Arabidopsis thaliana
Length:	189 amino acids
Gene Ontology:
Cellular Component:	nucleus [ISS]
Biological Process:	de-etiolation [IMP] response to auxin stimulus [IEP][IMP]
Molecular Function:	transcription factor activity [ISS]

Sequence:

Sequence:
[PDR BLAST]
[ProtParam]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAKEGLALEI TELRLGLPGD NYSEISVCGS SKKKKRVLSD MMTSSALDTE NENSVVSSVE  60
   61 DESLPVVKSQ AVGWPPVCSY RRKKNNEEAS KAIGYVKVSM DGVPYMRKID LGSSNSYINL 120
  121 VTVLENLFGC LGIGVAKEGK KCEYIIIYED KDRDWMLVGD VPWQMFKESC KRLRIVKRSD 180
  181 ATGFGLQQD

Protein Complex Data

No complex found for this protein.

Mass Spectrometry Data

No mass spectrometry results found for this protein.

Yeast Two-Hybrid Data

The following interactions contain this protein:

SHOWING SINGLE HITS. [ Hide Single Hits ]

[View our yeast two-hybrid interpretation guidelines.]

No yeast two-hybrid interactions found for this protein.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

#		Region(s)	Method	Confidence	Match Description
1	View Details	[1..91]	Pfam	5.045757	No description for PF02309.7 was found. No confident structure predictions are available.
2	View Details	[92..189]	FFAS03	1.25	Bud emergence mediator Bemp1

Protein predicted to be:	GLOBULAR (No transmembrane regions or signal peptide)
Confidence of classification:	0.99

Protein Overview: IAA6_ARATH

Protein Complex Data

Mass Spectrometry Data

Yeast Two-Hybrid Data

Microscopy / Localization Data

Protein Structure Data

Philius Transmembrane Prediction: