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Protein Overview: GLGL4_ARATH

General Information:
Name(s) found: GLGL4_ARATH [Swiss-Prot]
Description(s) found:
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  • gi|79322688|ref|NP_001031391.1| APL4; glucose-1-phosphate adenylyltransferase [Arabidopsis thaliana] [NCBI NR]
  • gi|4567231|gb|AAD23646.1| putative ADP-glucose pyrophosphorylase large subunit [Arabidopsis thaliana] [NCBI NR]
  • pir||A84603 hypothetical protein At2g21590 [imported] - Arabidopsis thaliana [NCBI NR]
  • gi|222423718|dbj|BAH19825.1| AT2G21590 [Arabidopsis thaliana] [NCBI NR]
  • gi|20465645|gb|AAM20291.1| putative ADP-glucose pyrophosphorylase large subunit [Arabidopsis thaliana] [NCBI NR]
  • gi|17979398|gb|AAL49924.1| putative ADP-glucose pyrophosphorylase large subunit [Arabidopsis thaliana] [NCBI NR]
  • gi|15226593|ref|NP_179753.1| APL4; glucose-1-phosphate adenylyltransferase [Arabidopsis thaliana] [NCBI NR]
  • gi|11386853|sp|Q9SIK1.1|GLGL4_ARATH RecName: Full=Probable glucose-1-phosphate adenylyltransferase large subunit, chloroplastic; AltName: Full=Alpha-D-glucose-1-phosphate adenyl transferase; AltName: Full=ADP-glucose pyrophosphorylase; AltName: Full=AGPas [NCBI NR]
  • Probable glucose-1-phosphate adenylyltransferase large subunit, chloroplastic OS=Arabidopsis thaliana GN=At2g21590 PE=2 SV=1 [Swiss-Prot]
  • (Q9SIK1) Probable glucose-1-phosphate adenylyltransferase large subunit, chloroplast precursor (EC 2.7.7.27) (ADP-glucose synthase) (ADP-glucose pyrophosphorylase) (AGPASE S) (Alpha-D-glucose-1-phosphate adenyl transferase) [Swiss-Prot]
  • putative ADP-glucose pyrophosphorylase large subunit [Arabidopsis thaliana]gi|17979398|gb|AAL49924.1| putative ADP-glucose pyrophosphorylase large subunit [Arabidopsis thaliana]gi|4567231|gb|AAD23646.1| putative ADP-glucose pyrophosphorylase large subun [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 Probable glucose-1-phosphate adenylyltransferase large subunit, chloroplast precursor [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: APL4 | APL4 (large subunit of AGP 4); glucose-1-phosphate adenylyltransferase | chr2:9246442-9249230 FORWARD [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • putative ADP-glucose pyrophosphorylase large subunit [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • APL4; glucose-1-phosphate adenylyltransferase [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • Probable glucose-1-phosphate adenylyltransferase large subunit, chloroplast precursor (ADP-glucose synthase) (ADP-glucose pyrophosphorylase) (AGPase S) (Alpha-D-glucose-1-phosphate adenyl transferase) [nr-271106-contam.fasta]
  • | Symbols: APL4 | Glucose-1-phosphate adenylyltransferase family protein | chr2:9239362-9242150 FORWARD LENGTH=523 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
    • Organism: Arabidopsis thaliana
    Length: 523 amino acids

    Gene Ontology:
    Cellular Component: glucose-1-phosphate adenylyltransferase complex [IDA]
    Biological Process: starch biosynthetic process [TAS]
    Molecular Function: glucose-1-phosphate adenylyltransferase activity [IDA][ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDSSYSFALG TSSSILPKLS FRNVENRFYG EKNNNNGLCK RFGSDLGSKK FRNQKFKHGV  60
   61 VYAVATSDNP KKAMTVKTSM FERRKVDPQN VAAIILGGGN GAKLFPLTMR AATPAVPVGG 120
  121 CYRLIDIPMS NCINSCINKI FVLTQFNSAS LNRHLARTYF GNGINFGGGF VEVLAATQTP 180
  181 GEAGKKWFQG TADAVRKFLW VFEDAKNRNI ENILILSGDH LYRMNYMDFV QSHVDSNADI 240
  241 TLSCAPVSES RASNFGLVKI DRGGRVIHFS EKPTGVDLKS MQTDTTMLGL SHQEATDSPY 300
  301 IASMGVYCFK TEALLNLLTR QYPSSNDFGS EVIPAAIRDH DVQGYIFRDY WEDIGTIKTF 360
  361 YEANLALVEE RPKFEFYDPE TPFYTSPRFL PPTKAEKCRM VDSIISHGCF LRECSVQRSI 420
  421 IGERSRLDYG VELQDTLMLG ADYYQTESEI ASLLAEGKVP IGIGKDTKIR KCIIDKNAKI 480
  481 GKNVIIMNKG DVQEADRPEE GFYIRSGITV IVEKATIQDG TVI

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..85] PSI-BLAST 5.045757 Crystal structure of Inosine-5'-monophosphate dehydrogenase (TM1347) from THERMOTOGA MARITIMA at 2.18 A resolution
    2 View Details [86..523] PSI-BLAST 68.09691 Crystal structure of potato tuber ADP-glucose pyrophosphorylase

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2
    Term Confidence Notes
  • acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine O-acyltransferase activity
    		•  2.31513836185329 bayes_pls_golite062009
  • catalytic activity
    		•  2.25720704697246 bayes_pls_golite062009
  • transferase activity, transferring hexosyl groups
    		•  2.04393180556087 bayes_pls_golite062009
  • O-acyltransferase activity
    		•  1.75961983651531 bayes_pls_golite062009
  • transferase activity
    		•  1.67251862595728 bayes_pls_golite062009
  • UDP-glycosyltransferase activity
    		•  1.51711005399931 bayes_pls_golite062009
  • cytidylyltransferase activity
    		•  1.46439247968206 bayes_pls_golite062009
  • transferase activity, transferring glycosyl groups
    		•  1.21894113759929 bayes_pls_golite062009
  • glucose-1-phosphate adenylyltransferase activity
    		•  1.1107654322416 bayes_pls_golite062009
  • acyltransferase activity
    		•  1.1088759555825 bayes_pls_golite062009
  • transferase activity, transferring acyl groups other than amino-acyl groups
    		•  1.10852250644129 bayes_pls_golite062009
  • transferase activity, transferring acyl groups
    		•  0.886009567107207 bayes_pls_golite062009
  • 3-deoxy-manno-octulosonate cytidylyltransferase activity
    		•  0.83115346830439 bayes_pls_golite062009
  • UDP-N-acetylglucosamine diphosphorylase activity
    		•  0.696745721981411 bayes_pls_golite062009
  • nucleotidyltransferase activity
    		•  0.67147527259372 bayes_pls_golite062009
  • uridylyltransferase activity
    		•  0.54930147038803 bayes_pls_golite062009
  • acetylgalactosaminyltransferase activity
    		•  0.48277064848483 bayes_pls_golite062009
  • mannose-phosphate guanylyltransferase activity
    		•  0.38929738612511 bayes_pls_golite062009
  • transferase activity, transferring phosphorus-containing groups
    		•  0.280335197569099 bayes_pls_golite062009
  • glucose-1-phosphate thymidylyltransferase activity
    		•  0.204810937394121 bayes_pls_golite062009
  • guanylyltransferase activity
    		•  0.14847697203788 bayes_pls_golite062009
  • polypeptide N-acetylgalactosaminyltransferase activity
    		•  0.10541627748542 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.89

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle