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Protein Overview: FUM2_ARATH

General Information:
Name(s) found: FUM2_ARATH [Swiss-Prot]
Description(s) found:
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  • gi|9758242|dbj|BAB08741.1| fumarate hydratase [Arabidopsis thaliana] [NCBI NR]
  • gi|39931631|sp|Q9FI53.1|FUM2_ARATH RecName: Full=Fumarate hydratase 2, chloroplastic; Short=Fumarase 2; Flags: Precursor [NCBI NR]
  • gi|21360525|gb|AAM47378.1| AT5g50950/K3K7_11 [Arabidopsis thaliana] [NCBI NR]
  • gi|15529147|gb|AAK97668.1| AT5g50950/K3K7_11 [Arabidopsis thaliana] [NCBI NR]
  • gi|15241331|ref|NP_199908.1| fumarate hydratase, putative / fumarase, putative [Arabidopsis thaliana] [NCBI NR]
  • Fumarate hydratase 2, chloroplastic OS=Arabidopsis thaliana GN=FUM2 PE=2 SV=1 [Swiss-Prot]
  • (Q9FI53) Fumarate hydratase 2, chloroplast precursor (EC 4.2.1.2) (Fumarase 2) [athaliana3702.FASTAC.txt]
  • fumarate hydratase [Arabidopsis thaliana]gi|21360525|gb|AAM47378.1| AT5g50950/K3K7_11 [Arabidopsis thaliana]gi|15529147|gb|AAK97668.1| AT5g50950/K3K7_11 [Arabidopsis thaliana]gi|15241331|ref|NP_199908.1| fumarate hydratase, putative / fumarase, putativ [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 Splice Isoform 1 of Fumarate hydratase 2, chloroplast precursor [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: | fumarate hydratase, putative / fumarase, putative | chr5:20746913-20750862 FORWARD [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • AT5g50950/K3K7_11 [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • fumarate hydratase [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • catalytic/ fumarate hydratase [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • Fumarate hydratase 2, chloroplast precursor (Fumarase 2) [nr-271106-contam.fasta]
  • fumarate hydratase, putative / fumarase, putative [Arabidopsis thaliana] [NCBI-RefSeq_Human_na_04-23-2010_reversed.fasta]
  • | Symbols: FUM2 | FUMARASE 2 | chr5:20729687-20733636 FORWARD LENGTH=499 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
    • Organism: Arabidopsis thaliana
    Length: 499 amino acids

    Gene Ontology:
    Cellular Component: mitochondrion [IDA]
    Biological Process: response to salt stress [IEP]
    Molecular Function: protein binding [IPI]
    fumarate hydratase activity [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAALTMQFEG EKKNVSEVAD VTLKQEDEQQ ERRSYSTPFR EERDTFGPIQ VPSDKLWGAQ  60
   61 TQRSLQNFEI GGDRERMPEP IVRAFGVLKK CAAKVNMEYG LDPMIGEAIM EAAQEVAEGK 120
  121 LNDHFPLVVW QTGSGTQSNM NANEVIANRA AEILGHKRGE KIVHPNDHVN RSQSSNDTFP 180
  181 TVMHIAAATE ITSRLIPSLK NLHSSLESKS FEFKDIVKIG RTHTQDATPL TLGQEFGGYA 240
  241 TQVEYGLNRV ACTLPRIYQL AQGGTAVGTG LNTKKGFDVK IAAAVAEETN LPFVTAENKF 300
  301 EALAAHDACV ETSGSLNTIA TSLMKIANDI RFLGSGPRCG LGELSLPENE PGSSIMPGKV 360
  361 NPTQCEALTM VCAQVMGNHV AVTIGGSNGH FELNVFKPVI ASALLHSIRL IADASASFEK 420
  421 NCVRGIEANR ERISKLLHES LMLVTSLNPK IGYDNAAAVA KRAHKEGCTL KHAAMKLGVL 480
  481 TSEEFDTLVV PEKMIGPSD

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..499] PSI-BLAST 155.0 RECOMBINANT YEAST FUMARASE

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • fumarate hydratase activity
    		•  4.22589182982073 bayes_pls_golite062009
  • catalytic activity
    		•  2.51282259572665 bayes_pls_golite062009
  • lyase activity
    		•  2.31268471569846 bayes_pls_golite062009
  • carbon-nitrogen lyase activity
    		•  2.2046475419807 bayes_pls_golite062009
  • histidine ammonia-lyase activity
    		•  0.948129236753279 bayes_pls_golite062009
  • amidine-lyase activity
    		•  0.901614580251298 bayes_pls_golite062009
  • binding
    		•  0.854855116369286 bayes_pls_golite062009
  • argininosuccinate lyase activity
    		•  0.617974375213548 bayes_pls_golite062009
  • ammonia-lyase activity
    		•  0.491229595527877 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle