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Protein Overview: FAD3D_ARATH

General Information:
Name(s) found: FAD3D_ARATH [Swiss-Prot]
Description(s) found:
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  • gi|516045|gb|AAA65621.1| omega-3 fatty acid desaturase [NCBI NR]
  • gi|497219|gb|AAB60302.1| chloroplast linoleate desaturase [NCBI NR]
  • gi|471093|dbj|BAA04504.1| plastid fatty acid desaturase [Arabidopsis thaliana] [NCBI NR]
  • gi|18700268|gb|AAL77744.1| AT5g05580/MOP10_12 [Arabidopsis thaliana] [NCBI NR]
  • gi|15239175|ref|NP_196177.1| FAD8 (FATTY ACID DESATURASE 8); omega-3 fatty acid desaturase [Arabidopsis thaliana] [NCBI NR]
  • gi|13605712|gb|AAK32849.1|AF361837_1 AT5g05580/MOP10_12 [Arabidopsis thaliana] [NCBI NR]
  • gi|1345972|sp|P48622.1|FAD3D_ARATH RecName: Full=Temperature-sensitive omega-3 fatty acid desaturase, chloroplastic; Flags: Precursor [NCBI NR]
  • gi|10178135|dbj|BAB11547.1| temperature-sensitive omega-3 fatty acid desaturase, chloroplast precursor [Arabidopsis thaliana] [NCBI NR]
  • (P48622) Temperature-sensitive omega-3 fatty acid desaturase, chloroplast precursor (EC 1.14.19.-) [Swiss-Prot]
  • Temperature-sensitive sn-2 acyl-lipid omega-3 desaturase (ferredoxin), chloroplastic OS=Arabidopsis thaliana GN=FAD8 PE=1 SV=1 [Swiss-Prot]
  • plastid fatty acid desaturase [Arabidopsis thaliana]gi|10178135|dbj|BAB11547.1| temperature-sensitive omega-3 fatty acid desaturase, chloroplast precursor [Arabidopsis thaliana]gi|18700268|gb|AAL77744.1| AT5g05580/MOP10_12 [Arabidopsis thaliana]gi|1360 [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 Temperature-sensitive omega-3 fatty acid desaturase, chloroplast precursor [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: SH1, FAD8 | FAD8 (FATTY ACID DESATURASE 8); omega-3 fatty acid desaturase | chr5:1664332-1666346 FORWARD [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • AT5g05580/MOP10_12 [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • chloroplast linoleate desaturase [nr-271106-contam.fasta]
  • omega-3 fatty acid desaturase [nr-271106-contam.fasta]
  • temperature-sensitive omega-3 fatty acid desaturase, chloroplast precursor [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • plastid fatty acid desaturase [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • FAD8 (FATTY ACID DESATURASE 8); omega-3 fatty acid desaturase [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • Temperature-sensitive omega-3 fatty acid desaturase, chloroplast precursor [nr-271106-contam.fasta]
  • | Symbols: FAD8 | fatty acid desaturase 8 | chr5:1664331-1666345 FORWARD LENGTH=435 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
  • Temperature-sensitive omega-3 fatty acid desaturase, chloroplastic OS=Arabidopsis thaliana GN=FAD8 PE=2 SV=1 [ARATH-contam.fasta]
    • Organism: Arabidopsis thaliana
    Length: 435 amino acids

    Gene Ontology:
    Cellular Component: chloroplast [ISS]
    chloroplast envelope [IDA]
    Biological Process: response to temperature stimulus [IEP]
    fatty acid biosynthetic process [IMP]
    Molecular Function: omega-3 fatty acid desaturase activity [IMP]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASSVLSECG FRPLPRFYPK HTTSFASNPK PTFKFNPPLK PPSSLLNSRY GFYSKTRNWA  60
   61 LNVATPLTTL QSPSEEDTER FDPGAPPPFN LADIRAAIPK HCWVKNPWMS MSYVVRDVAI 120
  121 VFGLAAVAAY FNNWLLWPLY WFAQGTMFWA LFVLGHDCGH GSFSNDPRLN SVAGHLLHSS 180
  181 ILVPYHGWRI SHRTHHQNHG HVENDESWHP LPESIYKNLE KTTQMFRFTL PFPMLAYPFY 240
  241 LWNRSPGKQG SHYHPDSDLF LPKEKKDVLT STACWTAMAA LLVCLNFVMG PIQMLKLYGI 300
  301 PYWIFVMWLD FVTYLHHHGH EDKLPWYRGK EWSYLRGGLT TLDRDYGWIN NIHHDIGTHV 360
  361 IHHLFPQIPH YHLVEATEAA KPVLGKYYRE PKNSGPLPLH LLGSLIKSMK QDHFVSDTGD 420
  421 VVYYEADPKL NGQRT

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..182] FFAS03 0.977 N-terminal domains of the minor coat protein g3p; TolA
    2 View Details [183..435] Pfam 39.187087 No description for PF00487.15 was found. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
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