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Protein Overview: DOF37_ARATH

General Information:
Name(s) found: DOF37_ARATH [Swiss-Prot]
Description(s) found:
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  • gi|6899883|emb|CAB71892.1| transcription factor BBFa [Arabidopsis thaliana] [NCBI NR]
  • gi|4581965|emb|CAB40190.1| DNA-binding protein [Arabidopsis thaliana] [NCBI NR]
  • gi|24211608|sp|Q43385.2|DOF37_ARATH RecName: Full=Dof zinc finger protein DOF3.7; Short=AtDOF3.7; AltName: Full=Dof affecting germination 1; AltName: Full=Transcription factor BBFa; Short=AtBBFa; AltName: Full=RolB domain B factor a [NCBI NR]
  • gi|193885149|gb|ACF28388.1| At3g61850 [Arabidopsis thaliana] [NCBI NR]
  • gi|15228621|ref|NP_191744.1| DAG1 (dof affecting germination 1); DNA binding / transcription factor [Arabidopsis thaliana] [NCBI NR]
  • gi|13938850|emb|CAA66600.2| Zn finger protein [Arabidopsis thaliana] [NCBI NR]
  • pir||T47977 transcription factor BBFa [similarity] - Arabidopsis thaliana [NCBI NR]
  • Dof zinc finger protein DOF3.7 OS=Arabidopsis thaliana GN=DOF3.7 PE=1 SV=2 [Swiss-Prot]
  • (Q43385) DOF zinc finger protein DAG1 (Dof affecting germination 1) (Transcription factor BBFa) (AtBBFa) (rolB domain B factor a) [Swiss-Prot]
  • DNA-binding protein [Arabidopsis thaliana]gi|13938850|emb|CAA66600.2| Zn finger protein [Arabidopsis thaliana]gi|6899883|emb|CAB71892.1| transcription factor BBFa [Arabidopsis thaliana]gi|11282342|pir||T47977 transcription factor BBFa [similarity] - Ar [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 Splice Isoform 1 of Dof zinc finger protein DOF3.7 [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: DAG1 | DAG1 (DOF AFFECTING GERMINATION 1); DNA binding / transcription factor | chr3:22906470-22908125 FORWARD [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • Zn finger protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • Dof zinc finger protein DOF3.7 (AtDOF3.7) (Dof affecting germination 1) (Transcription factor BBFa) (AtBBFa) (RolB domain B factor a) [nr-271106-contam.fasta]
  • transcription factor BBFa [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • DNA-binding protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • DAG1 (DOF AFFECTING GERMINATION 1); DNA binding / transcription factor [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: DAG1 | Dof-type zinc finger DNA-binding family protein | chr3:22895495-22897150 FORWARD LENGTH=296 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
    • Organism: Arabidopsis thaliana
    Length: 296 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IDA]
    Biological Process: response to red or far red light [IMP]
    seed germination [IMP]
    Molecular Function: DNA binding [ISS]
    transcription factor activity [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDATKWTQGF QEMINVKPME QMISSTNNNT PQQQPTFIAT NTRPNATASN GGSGGNTNNT  60
   61 ATMETRKARP QEKVNCPRCN STNTKFCYYN NYSLTQPRYF CKGCRRYWTE GGSLRNVPVG 120
  121 GSSRKNKRSS TPLASPSNPK LPDLNPPILF SSQIPNKSNK DLNLLSFPVM QDHHHHALEL 180
  181 LRSNGVSSRG MNTFLPGQMM DSNSVLYSSL GFPTMPDYKQ SNNNLSFSID HHQGIGHNTI 240
  241 NSNQRAQDNN DDMNGASRVL FPFSDMKELS STTQEKSHGN NTYWNGMFSN TGGSSW

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..128] FFAS03 1.13 RBP9 subunit of RNA polymerase II
    2 View Details [129..296] MSA 5.081991 View MSA. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle